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SCNpilot_expt_500_bf_scaffold_10040

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10040_1
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..382)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HD80_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97314.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SCNpilot_expt_500_bf_scaffold_10040_2
unknown

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979..1605
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10040_3

Not on your lists

comp(1673..2176)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Enterobacteria phage vB_EcoS_ACG-M12 RepID=K4FCD6_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKL87003.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_500_bf_scaffold_10040_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2179..2553)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00030831F5
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66845.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_500_bf_scaffold_10040_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2510..3292)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IHS2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66845.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_500_bf_scaffold_10040_6
unknown

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comp(3285..3488)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10040_7
unknown

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comp(3485..3604)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10040_8
unknown

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comp(3601..3894)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10040_9
unknown

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comp(4002..4622)
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10040_10
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4708..4896
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036A2904
Uncharacterized protein {ECO:0000313|EMBL:KKC24892.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_expt_500_bf_scaffold_10040_11
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4878..5549)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00038065A8
Phage repressor protein
Tax=GWF1_Sphingomonadales_63_6_curated
SCNpilot_expt_500_bf_scaffold_10040_12
unknown

Not on your lists

5700..5999
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10040_13
unknown

Not on your lists

6007..6072
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 13 items

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