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SCNpilot_expt_500_bf_scaffold_10415

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10415_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..450
DNA (450bp) protein (150aa)
trans-aconitate 2-methyltransferase (EC:2.1.1.144); K00598 trans-aconitate 2-methyltransferase [EC:2.1.1.144]
Trans-aconitate 2-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147}; EC=2.1.1.144 {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Trans-aconitate 2-methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TYC1_ALIDB
SCNpilot_expt_500_bf_scaffold_10415_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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658..1302
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYC2_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO23636.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_10415_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1420..3000
DNA (1581bp) protein (527aa)
aconitate hydratase 2; K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Aconitate hydratase 2 n=2 Tax=Alicycliphilus denitrificans RepID=E8TYC3_ALIDB
SCNpilot_expt_500_bf_scaffold_10415_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2954..3970
DNA (1017bp) protein (339aa)
aconitate hydratase 2; K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Aconitate hydratase 2 n=2 Tax=Alicycliphilus denitrificans RepID=E8TYC3_ALIDB
SCNpilot_expt_500_bf_scaffold_10415_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4744..6171)
DNA (1428bp) protein (476aa)
PhoH family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWF1_9BURK
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AFU45212.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_500_bf_scaffold_10415_6
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6569..7027)
DNA (459bp) protein (153aa)
bcp; thiol peroxidase; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Candidate thiol peroxidase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1A4_RAMTT
Candidate thiol peroxidase {ECO:0000313|EMBL:AEG93505.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_expt_500_bf_scaffold_10415_7
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7165..7560)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2KZC5_9BURK
hypothetical protein; K09008 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJL85415.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
SCNpilot_expt_500_bf_scaffold_10415_8
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7640..8914
DNA (1275bp) protein (425aa)
aminotransferase AlaT (EC:2.6.1.-); K14260 alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] rbh
Aminotransferase {ECO:0000313|EMBL:ABM31828.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABM31828.1};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Aminotransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLJ0_ACIAC rbh
SCNpilot_expt_500_bf_scaffold_10415_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8957..9958
DNA (1002bp) protein (334aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3]
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Homoserine dehydrogenase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1J3_LEPCP
Displaying 9 items

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