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SCNpilot_expt_500_bf_scaffold_10558

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10558_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1200
DNA (1200bp) protein (400aa)
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_expt_500_bf_scaffold_10558_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1383..2090
DNA (708bp) protein (236aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USJ9_9SPHN
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ENY81450.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
polysaccharide biosynthesis protein CapD
SCNpilot_expt_500_bf_scaffold_10558_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2080..3312
DNA (1233bp) protein (411aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USJ9_9SPHN rbh
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ENY81450.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
polysaccharide biosynthesis protein CapD
SCNpilot_expt_500_bf_scaffold_10558_4
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3418..4659
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K0E2_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB29979.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
sugar transferase
SCNpilot_expt_500_bf_scaffold_10558_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4634..5353
DNA (720bp) protein (240aa)
O-antigen biosynthesis glycosyltransferase n=2 Tax=Bordetella holmesii RepID=M5NT54_9BORD
Uncharacterized protein {ECO:0000313|EMBL:AIT08372.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glycosyltransferase
SCNpilot_expt_500_bf_scaffold_10558_6
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5304..5750
DNA (447bp) protein (149aa)
Glycosyl transferase, group 1 n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T229_9RHOB
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EAP78868.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. NAS-14.1.;"
group 1 glycosyl transferase
SCNpilot_expt_500_bf_scaffold_10558_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5789..7732)
DNA (1944bp) protein (648aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT00_9SPHN rbh
Asparagine synthase {ECO:0000313|EMBL:ENY81454.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_10558_8
unknown

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7875..8729
DNA (855bp) protein (285aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10558_9
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8800..9816)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D9T1_COMTE
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_expt_500_bf_scaffold_10558_10
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9859..10995
DNA (1137bp) protein (379aa)
Glycosyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1U3_9SPHN rbh
putative glycosyltransferase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_expt_500_bf_scaffold_10558_11
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10990..11889)
DNA (900bp) protein (300aa)
Putative glycosyltransferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I888_BORPD
glycosyltransferase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_expt_500_bf_scaffold_10558_12
Candidatus Puniceispirillum marinum, Candidatus Puniceispirillum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11898..12794)
DNA (897bp) protein (299aa)
SAM-dependent methyltransferase n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BPT7_PUNMI
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:ADE40589.1}; TaxID=488538 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster; Candidatus Puniceispirillum.;" source="Puniceispirillum marinum (strain IMCC1322).;"
SCNpilot_expt_500_bf_scaffold_10558_13
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12869..14050)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL17 RepID=UPI000378E551
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
Displaying 13 items

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