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SCNpilot_expt_500_bf_scaffold_14347

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_14347_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..183)
DNA (183bp) protein (61aa)
50S ribosomal protein L5 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJD9_9BRAD
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
SCNpilot_expt_500_bf_scaffold_14347_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(176..490)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCN0_9BRAD
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
SCNpilot_expt_500_bf_scaffold_14347_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(857..1102)
DNA (246bp) protein (82aa)
30S ribosomal protein S17 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAC8_9BRAD
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_expt_500_bf_scaffold_14347_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1113..1328)
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=2 Tax=Oligotropha carboxidovorans RepID=B6JEU1_OLICO
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000313|EMBL:AEI07022.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_bf_scaffold_14347_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1339..1752)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=2 Tax=Bradyrhizobiaceae RepID=F7QPY9_9BRAD
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
SCNpilot_expt_500_bf_scaffold_14347_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1786..2487)
DNA (702bp) protein (234aa)
30S ribosomal protein S3 n=1 Tax=Afipia birgiae RepID=UPI000316D88D
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
SCNpilot_expt_500_bf_scaffold_14347_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2505..2891)
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=2 Tax=Bradyrhizobiaceae RepID=F7QPZ1_9BRAD
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
SCNpilot_expt_500_bf_scaffold_14347_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2910..3185)
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=2 Tax=Oligotropha carboxidovorans RepID=RS19_OLICO
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_bf_scaffold_14347_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3198..3998)
DNA (801bp) protein (267aa)
50S ribosomal protein L2 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7D3_9BRAD rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
SCNpilot_expt_500_bf_scaffold_14347_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4010..4201)
DNA (192bp) protein (64aa)
50S ribosomal protein L23 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH68_AFIFE
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
Displaying 10 items

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