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SCNpilot_expt_500_bf_scaffold_14973

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_14973_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..903
DNA (903bp) protein (301aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Dyella japonica RepID=UPI0002FBE437
SCNpilot_expt_500_bf_scaffold_14973_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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867..1457
DNA (591bp) protein (197aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQM0_9GAMM
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_bf_scaffold_14973_1].
SCNpilot_expt_500_bf_scaffold_14973_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1463..1945
DNA (483bp) protein (161aa)
Rare lipoprotein B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQM1_9GAMM
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Rare lipoprotein B
SCNpilot_expt_500_bf_scaffold_14973_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1945..2955
DNA (1011bp) protein (337aa)
DNA polymerase III, delta subunit (EC:2.7.7.7) rbh
DNA polymerase III subunit delta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJC7_9GAMM rbh
DNA polymerase III subunit delta {ECO:0000313|EMBL:EIL87318.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_expt_500_bf_scaffold_14973_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2952..3584
DNA (633bp) protein (211aa)
nicotinate/nicotinamide nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQM3_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_14973_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3597..3692)
DNA (96bp) protein (32aa)
Phosphatidate cytidylyltransferase protein {ECO:0000313|EMBL:AJC83651.1}; EC=2.7.7.41 {ECO:0000313|EMBL:AJC83651.1};; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
SCNpilot_expt_500_bf_scaffold_14973_7
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4494..4772)
DNA (279bp) protein (93aa)
acyltransferase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036DBFE5
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EGK71505.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
phospholipid/glycerol acyltransferase
Displaying 7 items

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