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SCNpilot_expt_500_bf_scaffold_14995

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_14995_1
unknown

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comp(1..174)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_14995_2
unknown

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comp(645..1538)
DNA (894bp) protein (298aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_14995_3
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2185..2727
DNA (543bp) protein (181aa)
Type I restriction-modification system restriction subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSM2_TISMK
hsdR; type I restriction-modification system restriction subunit
Type I restriction-modification system restriction subunit {ECO:0000313|EMBL:AFK55760.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_500_bf_scaffold_14995_4
unknown

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comp(2570..3082)
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_14995_5
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3761..5098
DNA (1338bp) protein (446aa)
Type I restriction-modification system restriction subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSM2_TISMK
DEAD/DEAH box helicase {ECO:0000313|EMBL:KGJ23533.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hsdR; type I restriction-modification system restriction subunit
SCNpilot_expt_500_bf_scaffold_14995_6
Pseudomonas coronafaciens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5088..5678
DNA (591bp) protein (197aa)
Putative type I restriction-modification system restriction subunit n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=F2ZGA5_9PSED rbh
Putative type I restriction-modification system restriction subunit {ECO:0000313|EMBL:EGI01445.1}; TaxID=563797 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas coronafaciens.;" source="Pseudomonas coronafaciens pv. oryzae str. 1_6.;"
hsdS-1; type I restriction enzyme subunit S
SCNpilot_expt_500_bf_scaffold_14995_7
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

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5678..6364
DNA (687bp) protein (229aa)
restriction modification system DNA specificity subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Restriction modification system DNA specificity domain n=1 Tax=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) RepID=A4Y1R3_SHEPC
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
SCNpilot_expt_500_bf_scaffold_14995_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6361..7584
DNA (1224bp) protein (408aa)
Anticodon nuclease n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSM4_TISMK rbh
prrC; anticodon nuclease rbh
Anticodon nuclease {ECO:0000313|EMBL:AFK55762.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_500_bf_scaffold_14995_9
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7581..8030
DNA (450bp) protein (150aa)
type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Type I restriction system adenine methylase (HsdM) n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DM08_9CHRO
Type I restriction system adenine methylase HsdM {ECO:0000313|EMBL:KFB10492.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
SCNpilot_expt_500_bf_scaffold_14995_10
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8182..8499
DNA (318bp) protein (106aa)
Type I restriction-modification system, M subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSM5_TISMK
Type I restriction-modification protein subunit M {ECO:0000313|EMBL:KFI30912.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
type I restriction-modification system, M subunit
Displaying 10 items

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