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SCNpilot_expt_500_bf_scaffold_4242

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4242_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..324)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASJ1_9MICO
Protein-disulfide isomerase {ECO:0000313|EMBL:EIC07578.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
protein-disulfide isomerase
SCNpilot_expt_500_bf_scaffold_4242_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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594..1694
DNA (1101bp) protein (367aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E5Y2_9MICO rbh
ABC transporter related protein {ECO:0000313|EMBL:EIC07579.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sugar ABC transporter ATPase; K10243 cellobiose transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_4242_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1787..3091
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E5Y3_9MICO rbh
Lipopolysaccharide kinase {ECO:0000313|EMBL:EXJ52353.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4242_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3101..3739)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B908_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85099.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
NADH-flavin reductase; K07118
SCNpilot_expt_500_bf_scaffold_4242_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3816..4802)
DNA (987bp) protein (329aa)
rRNA methylase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Y5_9MICO
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EIC07582.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_4242_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4795..5835)
DNA (1041bp) protein (347aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASI6_9MICO
SCNpilot_expt_500_bf_scaffold_4242_7
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5941..6195)
DNA (255bp) protein (85aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
cysteinyl-tRNA synthetase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A7AA2
SCNpilot_expt_500_bf_scaffold_4242_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6459..7160
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030BA09C rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99525.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein; K03298 drug/metabolite transporter, DME family
SCNpilot_expt_500_bf_scaffold_4242_9
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7238..7858)
DNA (621bp) protein (207aa)
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
Bifunctional enzyme IspD/IspF n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEI7_9MICO
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_4242_10
unknown

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8052..8333
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4242_11
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8475..9347)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00035C2108
Acyltransferase {ECO:0000313|EMBL:EZP25279.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
Displaying 11 items

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