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SCNpilot_expt_500_bf_scaffold_4867

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4867_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..651
DNA (651bp) protein (217aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laeva
psrA; phosphoribosylpyrophosphate synthetase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7G8_9MICO
SCNpilot_expt_500_bf_scaffold_4867_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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696..3392
DNA (2697bp) protein (899aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7G9_9MICO rbh
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:EIC07160.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
P-type ATPase, translocating rbh
SCNpilot_expt_500_bf_scaffold_4867_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3480..3953
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AF15_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60223.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4867_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3950..4834
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA34_9MICO rbh
Membrane protein {ECO:0000313|EMBL:KIC60224.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
membrane-associated lipoprotein; K03734 thiamine biosynthesis lipoprotein
SCNpilot_expt_500_bf_scaffold_4867_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4846..6363
DNA (1518bp) protein (506aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7H2_9MICO
Flavodoxin reductase {ECO:0000313|EMBL:KIC60225.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
flavodoxin reductase (ferredoxin-NADPH reductase) family 1
SCNpilot_expt_500_bf_scaffold_4867_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6373..6903)
DNA (531bp) protein (177aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
signal transduction histidine kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A819_9MICO
SCNpilot_expt_500_bf_scaffold_4867_7
unknown

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7389..7583
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4867_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7813..8541)
DNA (729bp) protein (243aa)
Two-component system, OmpR family, response regulator n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9K5_9MICO
Two-component system, OmpR family, response regulator {ECO:0000313|EMBL:EPD85289.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator
SCNpilot_expt_500_bf_scaffold_4867_9
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8686..9699
DNA (1014bp) protein (338aa)
Magnesium and cobalt transporter CorA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A822_9MICO
Magnesium and cobalt transporter CorA {ECO:0000313|EMBL:EPD85293.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
corA; magnesium and cobalt transport protein CorA; K03284 magnesium transporter
SCNpilot_expt_500_bf_scaffold_4867_10
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9718..10614)
DNA (897bp) protein (299aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|RuleBase:RU000485};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
gnd; 6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] rbh
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Microbacterium sp. TS-1 RepID=U2XHM3_9MICO rbh
SCNpilot_expt_500_bf_scaffold_4867_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10617..11135)
DNA (519bp) protein (173aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
gnd; 6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7H8_9MICO
Displaying 11 items

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