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SCNpilot_expt_500_bf_scaffold_4917

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4917_1
unknown

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comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4917_2
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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325..561
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HXD0_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_expt_500_bf_scaffold_4917_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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558..827
DNA (270bp) protein (90aa)
Usg-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRD7_SPHAL
Usg-like protein
Usg-like protein {ECO:0000313|EMBL:ABF53785.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_500_bf_scaffold_4917_4
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(716..1318)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRD8_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF53784.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_500_bf_scaffold_4917_5
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1281..1508)
DNA (228bp) protein (76aa)
Heat-shock protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HXC7_9SPHN
Heat-shock protein {ECO:0000313|EMBL:EQB03985.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
heat shock protein Hsp20; K13993 HSP20 family protein
SCNpilot_expt_500_bf_scaffold_4917_6
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1502..1759)
DNA (258bp) protein (86aa)
Heat-shock protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HXC7_9SPHN
Heat-shock protein {ECO:0000313|EMBL:EQB03985.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
small heat shock protein; K13993 HSP20 family protein
SCNpilot_expt_500_bf_scaffold_4917_7
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1850..2329)
DNA (480bp) protein (160aa)
Heat shock protein Hsp20 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRE0_SPHAL
heat shock protein Hsp20; K04080 molecular chaperone IbpA
Heat shock protein Hsp20 {ECO:0000313|EMBL:ABF53782.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_500_bf_scaffold_4917_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2538..4523)
DNA (1986bp) protein (662aa)
Conjugal transfer protein TraI n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJS9_9SPHN rbh
conjugal transfer protein TraI rbh
Conjugal transfer protein TraI {ECO:0000313|EMBL:BAK67287.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_500_bf_scaffold_4917_9
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4852..5013)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003677A9C
Uncharacterized protein {ECO:0000313|EMBL:KHS45904.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
SCNpilot_expt_500_bf_scaffold_4917_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5369..7135)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000370A1D9 rbh
ParB-like protein; K03497 chromosome partitioning protein, ParB family rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_expt_500_bf_scaffold_4917_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7220..7582)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWL0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82820.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
Displaying 11 items

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