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SCNpilot_expt_500_bf_scaffold_12990

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12990_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..107)
DNA (105bp) protein (35aa)
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_12990_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(107..373)
DNA (267bp) protein (89aa)
Flagellar biosynthesis protein FliQ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE96_PELHB
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:KKB84828.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
flagellar biosynthesis protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_expt_500_bf_scaffold_12990_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(424..756)
DNA (333bp) protein (111aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE97_PELHB
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar hook-basal body complex protein FliE; K02408 flagellar hook-basal body complex protein FliE
SCNpilot_expt_500_bf_scaffold_12990_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(777..1187)
DNA (411bp) protein (137aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE98_PELHB
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar basal body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
SCNpilot_expt_500_bf_scaffold_12990_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1200..1604)
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE99_PELHB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
SCNpilot_expt_500_bf_scaffold_12990_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1777..2394
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL28445.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12990_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2701..3129
DNA (429bp) protein (143aa)
Flagellar biosynthesis protein FliP n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA1_PELHB
Flagellar biosynthesis protein flip {ECO:0000313|EMBL:KKC33628.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
SCNpilot_expt_500_bf_scaffold_12990_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3141..3407)
DNA (267bp) protein (89aa)
Tetratricopeptide repeat domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REA4_PELHB
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:KFC69145.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12990_9
unknown

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4217..4441
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_12990_10
unknown

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4673..5194
DNA (522bp) protein (174aa)

This feature has no annotations

Displaying 10 items

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