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SCNpilot_expt_500_bf_scaffold_2092

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2092_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..209
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E140_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84593.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2092_2
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

199..489
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00036996E6
Uncharacterized protein {ECO:0000313|EMBL:KIC57086.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2092_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

647..1450
DNA (804bp) protein (268aa)
uroporphyrinogen-III synthase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
Uroporphyrinogen III synthase HEM4 n=2 Tax=Microbacterium RepID=H8E138_9MICO
Uroporphyrinogen III methyltransferase/synthase {ECO:0000313|EMBL:EPD84595.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_2092_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1512..1958
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E136_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09437.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2092_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2025..2855)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A651_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC57090.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2092_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2852..4036)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B7N4_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84599.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_2092_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4525..4908
DNA (384bp) protein (128aa)
enoyl-CoA hydratase/carnithine racemase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AD40_9MICO
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EIC09434.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_2092_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4925..5572
DNA (648bp) protein (216aa)
enoyl-CoA hydratase/carnithine racemase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AD40_9MICO
Enoyl-CoA hydratase {ECO:0000313|EMBL:EPD84600.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_2092_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5576..6553
DNA (978bp) protein (326aa)
Heat shock protein DnaJ domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E130_9MICO rbh
Molecular chaperone DnaJ {ECO:0000313|EMBL:EXJ52607.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
molecular chaperone DnaJ
SCNpilot_expt_500_bf_scaffold_2092_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6630..7169
DNA (540bp) protein (180aa)
YaeQ family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5B0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52058.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2092_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7213..7824)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABN6_9MICO
NADP-dependent oxidoreductase {ECO:0000313|EMBL:KIC56788.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
alcohol dehydrogenase zinc-binding domain-containing protein; K07119
SCNpilot_expt_500_bf_scaffold_2092_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7877..8260)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWU8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86552.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K08987 putative membrane protein
SCNpilot_expt_500_bf_scaffold_2092_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8367..8948
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE31_9MICO
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC56797.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2092_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9049..10599
DNA (1551bp) protein (517aa)
Amino acid permease-associated region n=2 Tax=Microbacterium RepID=H8E5A4_9MICO rbh
Amino acid transporter {ECO:0000313|EMBL:EXJ52053.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
amino acid transporters
SCNpilot_expt_500_bf_scaffold_2092_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10653..11363
DNA (711bp) protein (237aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5A2_9MICO rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EXJ52051.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
short-chain dehydrogenase/reductase family oxidoreductase
SCNpilot_expt_500_bf_scaffold_2092_16
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11403..12650
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000306FDD4 rbh
Sodium:proton exchanger {ECO:0000313|EMBL:KHL00044.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Na+/H+ antiporter rbh
SCNpilot_expt_500_bf_scaffold_2092_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12653..13117
DNA (465bp) protein (155aa)
Glutaminase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5A1_9MICO
Glutaminase {ECO:0000313|EMBL:EIC08040.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glutaminase
SCNpilot_expt_500_bf_scaffold_2092_18
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13140..14030)
DNA (891bp) protein (297aa)
Aldo/keto reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5B1_9MICO rbh
Aldo/keto reductase {ECO:0000313|EMBL:EIC08050.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
aldo/keto reductase rbh
SCNpilot_expt_500_bf_scaffold_2092_19
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14136..16349
DNA (2214bp) protein (738aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-]
Glycogen debranching enzyme GlgX n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE14_9MICO rbh
SCNpilot_expt_500_bf_scaffold_2092_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16352..18727
DNA (2376bp) protein (792aa)
maltooligosyl trehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
Malto-oligosyltrehalose synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E584_9MICO rbh
Malto-oligosyltrehalose synthase {ECO:0000313|EMBL:EIC08023.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_2092_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19000..20655
DNA (1656bp) protein (552aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E583_9MICO rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC56340.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
putative peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_2092_22
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20690..21799
DNA (1110bp) protein (370aa)
Peptide/nickel transport system permease n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWS5_9MICO rbh
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPD86532.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ABC-type dipeptide/oligopeptide/nickel transporter permease; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_2092_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21796..22680
DNA (885bp) protein (295aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E581_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08020.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
putative peptide ABC transport system, permease; K02034 peptide/nickel transport system permease protein
SCNpilot_expt_500_bf_scaffold_2092_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22677..24359
DNA (1683bp) protein (561aa)
Peptide/nickel transport system ATP-binding protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIB4_9MICO rbh
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EPD86530.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_500_bf_scaffold_2092_25
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24356..25432
DNA (1077bp) protein (359aa)
Luciferase-like, subgroup n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E579_9MICO rbh
Luciferase {ECO:0000313|EMBL:KIC56327.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase rbh
SCNpilot_expt_500_bf_scaffold_2092_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25429..26088
DNA (660bp) protein (220aa)
Avi_7170 family CMD domain-containing protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABL0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08017.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2092_27
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26090..26710
DNA (621bp) protein (207aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Avi_7169 family alkylhydroperoxidase domain-containing protein n=2 Tax=Microbacterium RepID=S3AWS1_9MICO
peroxidase rbh
SCNpilot_expt_500_bf_scaffold_2092_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26783..27430
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E576_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC56324.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2092_29
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27918..28625
DNA (708bp) protein (236aa)
Amidohydrolase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIA8_9MICO
Amidohydrolase {ECO:0000313|EMBL:EPD86525.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
amidohydrolase
SCNpilot_expt_500_bf_scaffold_2092_30
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28770..29783
DNA (1014bp) protein (338aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
1,4-alpha-glucan branching enzyme; K01236 maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
Malto-oligosyltrehalose trehalohydrolase n=2 Tax=Microbacterium RepID=H8E573_9MICO
Displaying 30 items

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