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SCNpilot_expt_500_bf_scaffold_2386

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2386_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..423
DNA (423bp) protein (141aa)
Regulatory protein MarR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0W1_9MICO
Regulatory protein MarR {ECO:0000313|EMBL:EIC09362.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2386_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1531..1791)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6I7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84693.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
permease of the major facilitator superfamily
SCNpilot_expt_500_bf_scaffold_2386_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1788..2213)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B7Z7_9MICO
MarR family transcriptional regulator {ECO:0000313|EMBL:KIC58148.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2386_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2307..3176
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A824_9MICO rbh
Lysophospholipase {ECO:0000313|EMBL:KIC58150.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
lysophospholipase
SCNpilot_expt_500_bf_scaffold_2386_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3240..4289
DNA (1050bp) protein (350aa)
lipoate-protein ligase A; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Biotin/lipoate A/B protein ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U7_9MICO rbh
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EIC09348.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_2386_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4322..5179)
DNA (858bp) protein (286aa)
non-heme haloperoxidase (EC:1.11.1.-) rbh
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A830_9MICO rbh
Bromoperoxidase {ECO:0000313|EMBL:KIC58155.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_500_bf_scaffold_2386_7
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5408..6547)
DNA (1140bp) protein (380aa)
galactokinase; K00849 galactokinase [EC:2.7.1.6]
Galactokinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLY0_9MICO rbh
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_2386_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6544..7707)
DNA (1164bp) protein (388aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
Galactose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6J2_9MICO rbh
SCNpilot_expt_500_bf_scaffold_2386_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7779..8798
DNA (1020bp) protein (340aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B354F2
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ75034.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2386_10
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8942..9979)
DNA (1038bp) protein (346aa)
ogt2; putative methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WCR8_9MICO
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:GAB97075.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
SCNpilot_expt_500_bf_scaffold_2386_11
unknown

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comp(9986..10102)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2386_12
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10145..10660)
DNA (516bp) protein (172aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00035CCECC
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EZP28294.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_2386_13
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11951..12247
DNA (297bp) protein (99aa)
Glycerate 2-kinase {ECO:0000313|EMBL:KJL31613.1}; EC=2.7.1.165 {ECO:0000313|EMBL:KJL31613.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glycerate kinase; K00865 glycerate kinase [EC:2.7.1.31]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003706C07
SCNpilot_expt_500_bf_scaffold_2386_14
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12684..12929
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Mycobacterium avium RepID=V7J9I1_MYCAV
Uncharacterized protein {ECO:0000313|EMBL:ETB44303.1}; TaxID=1381559 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis 10-5606.;"
SCNpilot_expt_500_bf_scaffold_2386_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13877..14515)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E943_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06559.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_2386_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14593..15561
DNA (969bp) protein (323aa)
pheA; prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E942_9MICO rbh
Prephenate dehydratase {ECO:0000313|EMBL:EIC06558.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_2386_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15581..16651)
DNA (1071bp) protein (357aa)
Luciferase family oxidoreductase, group 1 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ARI2_9MICO rbh
Luciferase {ECO:0000313|EMBL:KIC58168.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
Displaying 17 items

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