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SCNpilot_expt_500_bf_scaffold_2634

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2634_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1479
DNA (1479bp) protein (493aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
gltX; glutamyl- and glutaminyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACF8_9MICO rbh
SCNpilot_expt_500_bf_scaffold_2634_2
unknown

Not on your lists

1738..1956
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2634_3
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2060..2224)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000369DE00
Uncharacterized protein {ECO:0000313|EMBL:EZP29910.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_2634_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2225..2482)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4B2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83057.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_2634_5
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2656..3258)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6B026
Uncharacterized protein {ECO:0000313|EMBL:EZP29910.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_2634_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3252..4013)
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4B2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC57636.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2634_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4139..4912
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4B3_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC57635.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2634_8
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4993..6462)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003694489
Uncharacterized protein {ECO:0000313|EMBL:EYT60911.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein; K01421 putative membrane protein
SCNpilot_expt_500_bf_scaffold_2634_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6747..7529
DNA (783bp) protein (261aa)
Regulatory protein DeoR n=2 Tax=Microbacterium RepID=H8E4B4_9MICO rbh
D-beta-D-heptose 1-phosphate adenosyltransferase {ECO:0000313|EMBL:KIC57634.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator of sugar metabolism; K03436 DeoR family transcriptional regulator, fructose operon transcriptional repressor
SCNpilot_expt_500_bf_scaffold_2634_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7526..8476
DNA (951bp) protein (317aa)
1-phosphofructokinase n=2 Tax=Microbacterium RepID=H8E4B5_9MICO rbh
1-phosphofructokinase {ECO:0000313|EMBL:EIC08164.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
fruK; 1-phosphofructokinase
SCNpilot_expt_500_bf_scaffold_2634_11
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8513..10573
DNA (2061bp) protein (687aa)
fruA; phosphotransferase system, fructose-specific IIC component; K02768 PTS system, fructose-specific IIA component [EC:2.7.1.69]; K02769 PTS system, fructose-specific IIB component [EC:2.7.1.69]; K02770 PTS system, fructose-specific IIC component
Phosphotransferase system, fructose-specific IICcomponent n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQR0_9MICO rbh
Phosphotransferase system, fructose-specific IICcomponent {ECO:0000313|EMBL:GAD33113.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_expt_500_bf_scaffold_2634_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10610..10876
DNA (267bp) protein (89aa)
Phosphocarrier protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALH4_9MICO
Phosphotransferase {ECO:0000313|EMBL:EXJ52688.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
phosphotransferase system, HPr-related protein; K11189 phosphocarrier protein
SCNpilot_expt_500_bf_scaffold_2634_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11057..11689)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000381AB52
Beta-lactamase {ECO:0000313|EMBL:EXJ52689.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Zn-dependent hydrolase of the beta-lactamase fold
SCNpilot_expt_500_bf_scaffold_2634_14
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11925..13079)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4B9_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83064.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2634_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13076..13588)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003137B82
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_500_bf_scaffold_2634_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13847..14884
DNA (1038bp) protein (346aa)
tellurium resistance protein TerC n=1 Tax=Microbacterium yannicii RepID=UPI0002DA53D2 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK00015.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein; K05794 tellurite resistance protein TerC
SCNpilot_expt_500_bf_scaffold_2634_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15040..16485
DNA (1446bp) protein (482aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
leuC; 3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALH7_9MICO rbh
SCNpilot_expt_500_bf_scaffold_2634_18
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16487..17083
DNA (597bp) protein (199aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=2 Tax=Microbacterium RepID=H8E4C3_9MICO
SCNpilot_expt_500_bf_scaffold_2634_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17154..18524
DNA (1371bp) protein (457aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
UDP-N-acetylglucosamine enolpyruvyl transferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Microbacterium RepID=H8E4C4_9MICO rbh
SCNpilot_expt_500_bf_scaffold_2634_20
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18528..19295
DNA (768bp) protein (256aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microbacterium RepID=UPI00037139C4 rbh
Acyl-phosphate glycerol 3-phosphate acyltransferase {ECO:0000313|EMBL:KIC57624.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
SCNpilot_expt_500_bf_scaffold_2634_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19270..21369
DNA (2100bp) protein (700aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
gpsA; glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2Y6_9MICO rbh
SCNpilot_expt_500_bf_scaffold_2634_22
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21377..21856)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4C8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC57622.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2634_23
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21879..22856
DNA (978bp) protein (326aa)
thiamine monophosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] rbh
Thiamine-monophosphate kinase n=2 Tax=Microbacterium RepID=H8E4C9_9MICO
Thiamine-monophosphate kinase {ECO:0000313|EMBL:EXJ52712.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_2634_24
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22858..23421)
DNA (564bp) protein (188aa)
N6-adenine-specific methylase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000381A1DC
DNA methyltransferase {ECO:0000313|EMBL:EZP29890.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_2634_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23448..24029)
DNA (582bp) protein (194aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003463021 rbh
Acyltransferase {ECO:0000313|EMBL:KJL20830.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phospholipid/glycerol acyltransferase
SCNpilot_expt_500_bf_scaffold_2634_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24095..26257
DNA (2163bp) protein (721aa)
recG; RecG-like helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALI7_9MICO rbh
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EPD83077.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Displaying 26 items

View Taxonomy