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SCNpilot_expt_500_bf_scaffold_2722

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2722_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..2554
DNA (2553bp) protein (851aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEA1_9MICO
Cell division protein FtsK {ECO:0000313|EMBL:KIC58339.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
FtsK/SpoIIIE-related protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_expt_500_bf_scaffold_2722_2
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2698..2916
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003756181
Putative DNA segregation ATPase {ECO:0000313|EMBL:EZP26687.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_2722_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3052..4128)
DNA (1077bp) protein (359aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ald; alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D8747
SCNpilot_expt_500_bf_scaffold_2722_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4189..5118)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIK4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86615.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ansA; L-asparaginase II
SCNpilot_expt_500_bf_scaffold_2722_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5211..5681
DNA (471bp) protein (157aa)
OsmC family protein n=2 Tax=Microbacterium RepID=H8E230_9MICO
OsmC family protein {ECO:0000313|EMBL:EIC09200.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
redox protein, regulator of disulfide bond formation
SCNpilot_expt_500_bf_scaffold_2722_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6013..6297)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCD1_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73579.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2722_7
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7328..8119)
DNA (792bp) protein (264aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000369A6EC rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EZP26690.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_2722_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8242..9216
DNA (975bp) protein (325aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
secreted peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE95_9MICO rbh
SCNpilot_expt_500_bf_scaffold_2722_9
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9241..10332
DNA (1092bp) protein (364aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteri
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIJ5_9MICO
SCNpilot_expt_500_bf_scaffold_2722_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10463..11311)
DNA (849bp) protein (283aa)
pyruvate formate-lyase activating enzyme (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4]
Pyruvate formate-lyase activating enzyme n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E234_9MICO
Pyruvate formate lyase-activating protein {ECO:0000313|EMBL:KIC58345.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_500_bf_scaffold_2722_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11367..13628)
DNA (2262bp) protein (754aa)
formate acetyltransferase (EC:2.3.1.54); K00656 formate C-acetyltransferase [EC:2.3.1.54] rbh
Formate acetyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E235_9MICO rbh
Formate acetyltransferase {ECO:0000313|EMBL:EIC09205.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_2722_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14017..15660)
DNA (1644bp) protein (548aa)
UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAC0_MICTS
SCNpilot_expt_500_bf_scaffold_2722_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15752..16477)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AX21_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86607.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
sortase-sorted surface protein
Displaying 13 items

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