ggKbase home page

SCNpilot_expt_500_bf_scaffold_2808

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2808_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..947
DNA (945bp) protein (315aa)
Protein RarD n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AHX4_9MICO
Protein RarD {ECO:0000313|EMBL:EPD86390.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
permease; K05786 chloramphenicol-sensitive protein RarD
SCNpilot_expt_500_bf_scaffold_2808_2
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1098..2279
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031A8A5B
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:KJQ55046.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_2808_3
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2395..3171)
DNA (777bp) protein (259aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQV3_9MICO rbh
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92717.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_2808_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3168..4169)
DNA (1002bp) protein (334aa)
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:KJQ55044.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ55044.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003829F57 rbh
livG; branched-chain amino acid ABC transporter,ATP-binding protein
SCNpilot_expt_500_bf_scaffold_2808_5
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4159..5148)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRI8_9MICO rbh
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:KJL23636.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
branched-chain amino acid transport system, permease component; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_500_bf_scaffold_2808_6
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5154..6467)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTQ7_9MICO rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KJL22535.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
inner-membrane translocator rbh
SCNpilot_expt_500_bf_scaffold_2808_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6691..8193
DNA (1503bp) protein (501aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4R0_9MICO rbh
SCNpilot_expt_500_bf_scaffold_2808_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8350..9192
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4Q9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07848.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_expt_500_bf_scaffold_2808_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9628..10158
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E6EC32
integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:BAJ73764.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2808_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10207..11844
DNA (1638bp) protein (546aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4Q8_9MICO
ABC transporter related protein {ECO:0000313|EMBL:EIC07847.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ATPase components of ABC transporters with duplicated ATPase domains
SCNpilot_expt_500_bf_scaffold_2808_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11860..12978
DNA (1119bp) protein (373aa)
IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205]
IMP dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AHW9_9MICO rbh
IMP dehydrogenase {ECO:0000313|EMBL:EPD86380.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_2808_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12978..13892
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCL1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59412.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2808_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13903..14400
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003812B91
Uncharacterized protein {ECO:0000313|EMBL:KJL31202.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2808_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14397..15980
DNA (1584bp) protein (528aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
guaA; GMP synthase, PP-ATPase domain/subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4Q3_9MICO
SCNpilot_expt_500_bf_scaffold_2808_15
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16141..17037)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XS01_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD35780.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2808_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17177..18184
DNA (1008bp) protein (336aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003091D9D rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EXJ51824.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_2808_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18248..19180
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCK7_9MICO
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KIC59417.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Na+ ABC transporter ATPase
SCNpilot_expt_500_bf_scaffold_2808_18
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19229..20173
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB74_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86373.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ABC transporter
SCNpilot_expt_500_bf_scaffold_2808_19
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20277..20771
DNA (495bp) protein (165aa)
peptidase, S8/S53 family (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWD3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86372.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_2808_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21167..22390
DNA (1224bp) protein (408aa)
peptidase, S8/S53 family (EC:3.4.21.-)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4P8_9MICO
Peptidase S8 {ECO:0000313|EMBL:EXJ51821.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Displaying 20 items

View Taxonomy