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SCNpilot_expt_500_bf_scaffold_7728

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7728_1
unknown

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2..481
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7728_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(488..973)
DNA (486bp) protein (162aa)
ATP synthase B chain precursor; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HWP0_9PROT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_7728_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(966..1445)
DNA (480bp) protein (160aa)
H+-transporting two-sector ATPase (subunit b'); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00035F1694
Uncharacterized protein {ECO:0000313|EMBL:AIL12366.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_7728_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1466..1690)
DNA (225bp) protein (75aa)
ATP synthase subunit C n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A909
ATP synthase subunit C {ECO:0000313|EMBL:AIL12367.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
atpE; ATP synthase subunit C
SCNpilot_expt_500_bf_scaffold_7728_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1737..2465)
DNA (729bp) protein (243aa)
ATP synthase subunit a n=1 Tax=Oceanibaculum indicum P24 RepID=K2IGJ3_9PROT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
atpB; F0F1-type ATP synthase, subunit a
SCNpilot_expt_500_bf_scaffold_7728_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2517..3998)
DNA (1482bp) protein (494aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Fragment) n=2 Tax=Candidatus Odyssella thessalonicensis RepID=D9I359_9RICK rbh
SCNpilot_expt_500_bf_scaffold_7728_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3995..4171)
DNA (177bp) protein (59aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A id=3529495 bin=GWA1_Alphaproteobacteria_45_9 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
Displaying 7 items

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