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SCNpilot_expt_500_bf_scaffold_7794

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7794_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..200
DNA (198bp) protein (66aa)
DEAD-like helicase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE08_RALP1
DEAD/DEAH box helicase
DEAD-like helicase {ECO:0000313|EMBL:ACS61968.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_expt_500_bf_scaffold_7794_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

312..713
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa MH27 RepID=V6ADY1_PSEAI
Uncharacterised protein {ECO:0000313|EMBL:CKG95469.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7794_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

710..1150
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=A1W5V6_ACISJ
Uncharacterised protein {ECO:0000313|EMBL:CKG95486.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7794_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1307..1918
DNA (612bp) protein (204aa)
Integrating conjugative element protein PilL, PFGI-1 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6H5_ALIDK rbh
integrating conjugative element protein PilL; K02487 type IV pili sensor histidine kinase and response regulator rbh
Integrating conjugative element protein PilL, PFGI-1 {ECO:0000313|EMBL:AEB84284.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_7794_5
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1915..2559
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4VX63_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AJE97671.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7794_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2569..3825
DNA (1257bp) protein (419aa)
Integrating conjugative element protein, PFL_4693 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6H7_ALIDK
integrating conjugative element protein
Integrating conjugative element protein, PFL_4693 family {ECO:0000313|EMBL:AEB84286.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_7794_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3822..4388
DNA (567bp) protein (189aa)
Integrating conjugative element protein, PFL_4695 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6H9_ALIDK rbh
integrating conjugative element protein rbh
Integrating conjugative element protein, PFL_4695 family {ECO:0000313|EMBL:AEB84288.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_7794_8
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4409..6568
DNA (2160bp) protein (720aa)
Conjugative coupling factor TraD n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4WAR5_PSEAI rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:AJE97667.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
conjugative coupling factor TraD rbh
SCNpilot_expt_500_bf_scaffold_7794_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6565..7260
DNA (696bp) protein (232aa)
Integrating conjugative element membrane protein, PFL_4697 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6I1_ALIDK
integrating conjugative element membrane protein
Integrating conjugative element membrane protein, PFL_4697 family {ECO:0000313|EMBL:AEB84290.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_7794_10
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7374..7781
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4WEA1_PSEAI
Integrative conjugative element protein, RAQPRD family {ECO:0000313|EMBL:EPX98534.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7794_11
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8154..8375
DNA (222bp) protein (74aa)
Integrating conjugative element membrane protein, PFL_4702 family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4JND3_9BURK
integrating conjugative element membrane protein
Integrating conjugative element membrane protein {ECO:0000313|EMBL:ENO89017.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
SCNpilot_expt_500_bf_scaffold_7794_12
Pantoea sp. PSNIH2, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8388..8810
DNA (423bp) protein (141aa)
Conjugative transfer region protein n=6 Tax=Proteobacteria RepID=N4VUQ6_PSEAI
Conjugal transfer protein {ECO:0000313|EMBL:AIX73488.1}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH2.;"
conjugative transfer region protein
SCNpilot_expt_500_bf_scaffold_7794_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8813..9505
DNA (693bp) protein (231aa)
Integrating conjugative element protein, PFL_4703 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G751_ALIDK rbh
integrating conjugative element protein rbh
Integrating conjugative element protein, PFL_4703 family {ECO:0000313|EMBL:AEB84295.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_7794_14
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9502..10431
DNA (930bp) protein (310aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=N4WE96_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO89020.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
integrating conjugative element protein rbh
SCNpilot_expt_500_bf_scaffold_7794_15
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11092..11427)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KEH07498.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_expt_500_bf_scaffold_7794_16
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11890..12219
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE23_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61983.1}; Flags: Precursor;; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_expt_500_bf_scaffold_7794_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12219..13364
DNA (1146bp) protein (382aa)
Conjugative transfer ATPase n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4VUQ0_PSEAI
conjugative transfer ATPase
Conjugative transfer ATPase, PFL_4706 family {ECO:0000313|EMBL:AEB84299.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 17 items

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