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SCNpilot_expt_500_bf_scaffold_7892

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7892_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1003)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3H1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83251.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
permease of the major facilitator superfamily
SCNpilot_expt_500_bf_scaffold_7892_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1247..1507
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E324_9MICO
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rpsT; ribosomal protein S20; K02968 small subunit ribosomal protein S20
SCNpilot_expt_500_bf_scaffold_7892_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1646..2680)
DNA (1035bp) protein (345aa)
DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3Z2_9MICO rbh
DNA polymerase III subunit delta {ECO:0000313|EMBL:KIC57226.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_500_bf_scaffold_7892_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3641..4756)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2J0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83248.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
membrane metal-binding protein; K02238 competence protein ComEC
SCNpilot_expt_500_bf_scaffold_7892_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4774..5940)
DNA (1167bp) protein (389aa)
ComEC/Rec2-related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E322_9MICO
Competence protein ComEC {ECO:0000313|EMBL:KIC57225.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
membrane metal-binding protein; K02238 competence protein ComEC
SCNpilot_expt_500_bf_scaffold_7892_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5937..6548)
DNA (612bp) protein (204aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=2 Tax=Microbacterium RepID=H8E321_9MICO
Competence protein ComEA helix-hairpin-helix repeat protein {ECO:0000313|EMBL:EIC08571.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
DNA uptake protein; K02237 competence protein ComEA
SCNpilot_expt_500_bf_scaffold_7892_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6654..9167)
DNA (2514bp) protein (838aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] rbh
Leucine--tRNA ligase n=2 Tax=Microbacterium RepID=H8E320_9MICO rbh
SCNpilot_expt_500_bf_scaffold_7892_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9264..10574)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9N2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83245.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
anthranilate/para-aminobenzoate synthase component I
SCNpilot_expt_500_bf_scaffold_7892_9
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10612..11283
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3Y8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83244.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7892_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11288..12322
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E317_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83243.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7892_11
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13041..14186)
DNA (1146bp) protein (382aa)
PTS system n=1 Tax=Microbacterium sp. TS-1 RepID=U2YUQ7_9MICO rbh
PTS system {ECO:0000313|EMBL:GAD34343.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
PTS N-acetylglucosamine transporter subunit IIABC
Displaying 11 items

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