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SCNpilot_expt_500_bf_scaffold_846_11

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(11608..12207)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, protease TraF n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHM8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 199.0
  • Bit_score: 300
  • Evalue 1.20e-78
  • rbh
Type IV secretory pathway, protease TraF {ECO:0000313|EMBL:CCW16700.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 199.0
  • Bit_score: 300
  • Evalue 1.70e-78
conjugal transfer protein traF similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 199.0
  • Bit_score: 294
  • Evalue 3.50e-77

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAGCCGCCTTCCCATCTCCCGCTTCGTGCCGCATCTGGCTGGCGCGACGATTGGCCTGACGCTGGGCACTCTGCTGCTCCCGATGCCCCCGCTGTTGCTCTGGAATGCCAGCGCCAGCGCGCCGCCGGGGCTATATGCGCTCAATCCGCTGAGCGAACCGGCAGTCGGCGCCATGGTGGCTGTGACCCCGCCGCCCGCCCTCGCCCGGTTTATGGCAGAACGCCGCTATCTTCCGATCGGCGTGCCGCTCCTCAAGCATGTCGCGGCACGGCCTGGTGCGCTGATCTGCCGACGCGATGCACGGGTGACGATCGACGGGCGCGCCGCTGCGTCTGCACGCCGGGCGGACAGCCTGGGCCGCCCCTTGCCGGTCTGGCGGGGCTGCCGGGTGCTCAAGGCGGGTGAGCTGTTCCTGCTCAATCGCGCGCCTGACAGTTTTGATGGACGCTATTTCGGGCCGATCCCGGCTGGCGGGTACATCGGTCGCGCCACACCGGTCCTCACCCGCAGCGCGCCGGAAGCGCCGCTGCGCTGGCATTCGGACTGCGCGCCGACGGCCTCTCACATCAGCAAGGAAGGAGACACCTCATGCAGATAG
PROTEIN sequence
Length: 200
MSRLPISRFVPHLAGATIGLTLGTLLLPMPPLLLWNASASAPPGLYALNPLSEPAVGAMVAVTPPPALARFMAERRYLPIGVPLLKHVAARPGALICRRDARVTIDGRAAASARRADSLGRPLPVWRGCRVLKAGELFLLNRAPDSFDGRYFGPIPAGGYIGRATPVLTRSAPEAPLRWHSDCAPTASHISKEGDTSCR*