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SCNpilot_expt_500_bf_scaffold_1283_17

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(20554..21495)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=2 Tax=Microbacterium RepID=H8E1N6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 239.0
  • Bit_score: 385
  • Evalue 4.40e-104
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EIC09056.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 239.0
  • Bit_score: 385
  • Evalue 6.20e-104
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 226.0
  • Bit_score: 355
  • Evalue 1.50e-95

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGCTGTCGGAGTCCTCGGAGTGCAGCGGTGCCGTCAGCGTCGAGGGCGAATCGGCGAGTGCGGCGAGCACGAGCTTGCGGTTCGTGAGGGACTTCGATCCGGGCACGGCGACCGTCGCGTGGACGGGGCGATCGACGTGGGGAGCGGCCCACGACGACGCGGCTTGCGGAGAGAGGGAATACCCGGTCGTGGTCATCGGGTTCTACCCTAACGAACCCCTCCGACCCCCTCGAATCGAAAGGCCACCGTTGACAACGATGCTCGCACCGGTTCTGCCGTTTGAGGCAGACGTAGACTGGGCCGCGATGGAAGAGCAGGCGGCGACAGACCCGCAGACATCCGAGGCATCCGAGACGACCGCGCACCGGCGCGCCCAGTTCGAGGAACAGGCGCTCCCGTTCATGGATCAGCTGTACGCGGCGGCGATGCGGATGACCCGCAACCCGGCCGACGCCGCCGACCTCGTGCAGGAGACGTTCGTCAAGGCGTTCGCGTCCTGGGCATCCTTCACGCAGGGCACGAACCTCAAGGCGTGGCTGTACCGGATCCTCACCAACACGTACATCAACACGTACCGCAAGAAGCAGCGTGAGCCGTACCAGGGCACGATCGACGAGCTCGAGGACTGGCAGCTGGGCGGGGCGGAATCGACCACCGCGACGAGCAGCCGTTCGGCCGAGGCGGAGGCGATCGACCACATGCCGGCGTCCGTCGTGAAGGATGCGCTGCAGTCGATCCCCGAGGACTTCCGGCTCGCGGTGTACCTCGCCGATGTCGAAGGCTTCGCGTATCAGGAGATCGCGGACATCATGAAAACCCCGATCGGCACCGTCATGAGCCGCCTGCACCGTGGCCGGCGCATGCTCCGTGACCTGCTGGCGGACTATGCGCGCGAGCGCGGCATCGAGGTGCCCGCCGCGAAGACGAGGAGCACGAGATGA
PROTEIN sequence
Length: 314
MLSESSECSGAVSVEGESASAASTSLRFVRDFDPGTATVAWTGRSTWGAAHDDAACGEREYPVVVIGFYPNEPLRPPRIERPPLTTMLAPVLPFEADVDWAAMEEQAATDPQTSEASETTAHRRAQFEEQALPFMDQLYAAAMRMTRNPADAADLVQETFVKAFASWASFTQGTNLKAWLYRILTNTYINTYRKKQREPYQGTIDELEDWQLGGAESTTATSSRSAEAEAIDHMPASVVKDALQSIPEDFRLAVYLADVEGFAYQEIADIMKTPIGTVMSRLHRGRRMLRDLLADYARERGIEVPAAKTRSTR*