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SCNpilot_expt_500_bf_scaffold_1290_30

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(24343..25332)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sphingobium japonicum BiD32 RepID=N1ML54_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 306.0
  • Bit_score: 309
  • Evalue 3.20e-81
  • rbh
LysR:LysR substrate-binding regulatory protein {ECO:0000313|EMBL:KEZ19457.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 314.0
  • Bit_score: 316
  • Evalue 6.30e-83
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 306.0
  • Bit_score: 174
  • Evalue 6.70e-41

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGCGTAAAATCCTCAAGGCCATGAAGAAGTGCCGGAAACAGCACTATGCAGAGGCGATCAGCCCTCTGCCCGTGCGGACCGGCATCGAGCGCCGGGAAATCGAGGCTGTGCTCGCACTGTATTTTTATGGCAGCATCGCCAAGGCGGCGGAAGCACTGGGAACCAAGCCGGCCAACGCGCGCAAGAAGTTGGGTGAACTCGAGTTCAAGCTCGGCATCCGGCTCTTCGAACAGGGCGGTAAGAGACGGACGCCGACGCCCGCCGGACGGGTTTTCCTCTCCCGCACCGCGCAGATTGTCACGGACTTCCACGCCCTGGTCGAAGCGAGTCGCCGTATCGGCGATGGCAAGGTCGGGCAAATCGCGATCGGCTATTATGGCCCTGTCGCCCATGGTGCCTTGCGCACGCTTCTGTTTGAAGATGCTGGTTTCCTCGCCGACATCGTGCGCAAGCCTGTCGAACTGGGACATGACCAGATGCGCGATGCGCTGGCCTCGGGCAGGATTGACCTCGCGATCTTGCGGGGGCGTCCCGATCAAATGTCGGCGCACTGTATTCCCCTCTGGGTCGAGCGGATCGTCATTCTCCTGCCTGCCGGACACCGGCTTCTGGCAAAGCCGGATCTGCAATGGTCCGATCTGGTGGAGGAGACATTTCTGGTCTCTCGCCACGGCCCATGTGCAGCGATCCGCGGGCTGCTTGTCGACCGCATGTCCCCATTTGGCGCGGAGCCAGACATCCGCCTTCAGGACATTGGTACAATGGCTCTGTACCAAATGGTGGGAGCAGGACATGGCATTTGCCTCGCCCTCGAATCCAGCTTGGGCGACCACTACGCCGACACCGAATATCGCGATCTGAGCGGGCCTGGCGGTTCGGAAAATGTGACCTTCTATGCCTGCTGGTGTGCGGATAATCCGAACCCTGCCCTCGGTCGTTTCCTGACCGCACTCAGGCAGGGCTATGCGAACGTGGACGGCGGCGCATGA
PROTEIN sequence
Length: 330
MRKILKAMKKCRKQHYAEAISPLPVRTGIERREIEAVLALYFYGSIAKAAEALGTKPANARKKLGELEFKLGIRLFEQGGKRRTPTPAGRVFLSRTAQIVTDFHALVEASRRIGDGKVGQIAIGYYGPVAHGALRTLLFEDAGFLADIVRKPVELGHDQMRDALASGRIDLAILRGRPDQMSAHCIPLWVERIVILLPAGHRLLAKPDLQWSDLVEETFLVSRHGPCAAIRGLLVDRMSPFGAEPDIRLQDIGTMALYQMVGAGHGICLALESSLGDHYADTEYRDLSGPGGSENVTFYACWCADNPNPALGRFLTALRQGYANVDGGA*