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SCNpilot_expt_500_bf_scaffold_4636_17

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(13959..14513)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCZ5_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 161.0
  • Bit_score: 178
  • Evalue 8.20e-42
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 161.0
  • Bit_score: 178
  • Evalue 2.60e-42
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:BAJ73634.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 161.0
  • Bit_score: 178
  • Evalue 1.20e-41

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 555
GTGAGCGCGGCCGACGCCGTGGGCGGTGGAACCGGCGCCCTGGACATCGTCACCGAGCTGGCGCACGCGTCGGACCGTGCCTTCGACGACGCCGTCGCTCCGTTGGTTCCGCTGCTCCTGCGGTACTTCGCGCGTCGCGTGACGCCGAGCGAGGACGCGGCGGACTGTACCTCCGAAACGCTCGTCGCTTTGTGGAGGCACCGCCGCCGTCTTCCCGCAGCAGAGGCGGAGCGACGCGCGTGGGCGTATGGCATCGCCCGGAACGTCCTCGCGAACCATCGGCGTGGGCGGGTCCGCCGCGATCTCGCGGACGACGCGCTCCGGGCCGCAGCCGCCACGCCGACGCCGCCGATCCCCGATGAGGCGTTCATCGCCGCCGAGGCGTTGAATCTCTTGCCCGAACGGGATCAAGAGCTCATCCGCCTGGTGGTGTGGGAGGAGCTCTCCATCGCCGAGGCGGGGCGTGCGCTCGGCATCGGCGCGGCGACCGCGCGCTCGCGGTATGCTCGCGCCCTCACGCGGTTGCGCGGCGTATACGCATCGCTCGACGCCTGA
PROTEIN sequence
Length: 185
VSAADAVGGGTGALDIVTELAHASDRAFDDAVAPLVPLLLRYFARRVTPSEDAADCTSETLVALWRHRRRLPAAEAERRAWAYGIARNVLANHRRGRVRRDLADDALRAAAATPTPPIPDEAFIAAEALNLLPERDQELIRLVVWEELSIAEAGRALGIGAATARSRYARALTRLRGVYASLDA*