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SCNpilot_expt_500_bf_scaffold_4636

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4636_1
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37..726
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI000371ABA6 rbh
Response regulator {ECO:0000313|EMBL:EZP28170.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
SCNpilot_expt_500_bf_scaffold_4636_2
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

723..1595
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADP4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59165.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4636_3
unknown

Not on your lists

1605..2336
DNA (732bp) protein (244aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4636_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2436..3497
DNA (1062bp) protein (354aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pgi; glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3R4_9MICO
SCNpilot_expt_500_bf_scaffold_4636_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4502..4807)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B867_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50583.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_4636_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4812..5999
DNA (1188bp) protein (396aa)
coaBC; phosphopantothenoylcysteine synthetase/decarboxylase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3Q8_9MICO
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:EIC08395.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_4636_7
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6178..6960
DNA (783bp) protein (261aa)
2,3-butanediol dehydrogenase, S-alcohol forming, (S)-acetoin-specific {ECO:0000313|EMBL:EPR76760.1}; EC=1.1.1.76 {ECO:0000313|EMBL:EPR76760.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
2,3-butanediol dehydrogenase, S-alcohol forming, (S)-acetoin-specific n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W274_9MICO rbh
butA; L-2,3-butanediol dehydrogenase/acetoin reductase rbh
SCNpilot_expt_500_bf_scaffold_4636_8
Dermacoccus nishinomiyaensis, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7069..8304)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Nocardiopsis prasina RepID=UPI000344B83F rbh
MFS transporter permease {ECO:0000313|EMBL:AIF40825.1}; TaxID=1274 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus nishinomiyaensis.;"
sugar (and other) transporter family protein rbh
SCNpilot_expt_500_bf_scaffold_4636_9
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8301..8951)
DNA (651bp) protein (217aa)
Transcriptional regulator, GntR family n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3BA07_9MICO
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFP58060.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
bacterial regulatory s, gntR family protein
SCNpilot_expt_500_bf_scaffold_4636_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9101..9478)
DNA (378bp) protein (126aa)
PTS system glucose subfamily transporter subunit IIA; K02755 PTS system, beta-glucosides-specific IIA component [EC:2.7.1.69]; K02756 PTS system, beta-glucosides-specific IIB component [EC:2.7.1.69]; K02757 PTS system, beta-glucosides-specific IIC component
PTS system, glucose subfamily, IIA component n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ARP9_9MICO
PTS mannose transporter subunit IIABC {ECO:0000313|EMBL:KIC59156.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_500_bf_scaffold_4636_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9478..11148)
DNA (1671bp) protein (557aa)
PTS system glucose subfamily transporter subunit IIA; K02755 PTS system, beta-glucosides-specific IIA component [EC:2.7.1.69]; K02756 PTS system, beta-glucosides-specific IIB component [EC:2.7.1.69]; K02757 PTS system, beta-glucosides-specific IIC component
PTS system, glucose subfamily, IIA subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3Q7_9MICO
PTS mannose transporter subunit IIABC {ECO:0000313|EMBL:KIC59156.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_500_bf_scaffold_4636_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11454..12347
DNA (894bp) protein (298aa)
16S rRNA uridine-516 pseudouridylate synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3Q6_9MICO
16S rRNA pseudouridylate synthase {ECO:0000313|EMBL:KIC59155.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
16S rRNA uridine-516 pseudouridylate synthase
SCNpilot_expt_500_bf_scaffold_4636_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12512..12682
DNA (171bp) protein (57aa)
CsbD family protein n=2 Tax=Microbacterium RepID=H8E3Q0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50594.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4636_14
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12747..13088
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JS29_ARTS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK01849.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_expt_500_bf_scaffold_4636_15
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13106..13666)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L1A5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM86074.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4636_16
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13672..13905)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KJQ52613.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
SCNpilot_expt_500_bf_scaffold_4636_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13959..14513)
DNA (555bp) protein (185aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCZ5_MICTS
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:BAJ73634.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_4636_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14510..15274)
DNA (765bp) protein (255aa)
Glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCZ6_MICTS
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ73635.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_4636_19
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15430..15828)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E2F0_9MICO
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KJL17839.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4636_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16708..17043
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3P4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08381.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_4636_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17124..18764
DNA (1641bp) protein (547aa)
Isocitrate lyase {ECO:0000313|EMBL:CDJ99031.1}; EC=4.1.3.1 {ECO:0000313|EMBL:CDJ99031.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
aceA; isocitrate lyase; K01637 isocitrate lyase [EC:4.1.3.1] rbh
isocitrate lyase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B5F6C rbh
SCNpilot_expt_500_bf_scaffold_4636_22
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18838..20454)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B856_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59142.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
Displaying 22 items

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