ggKbase home page

SCNpilot_expt_500_bf_scaffold_7518_4

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(4821..5900)

Top 3 Functional Annotations

Value Algorithm Source
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 357.0
  • Bit_score: 643
  • Evalue 4.20e-182
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 357.0
  • Bit_score: 643
  • Evalue 1.90e-181
thiouridylase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003801BDC similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 356.0
  • Bit_score: 647
  • Evalue 7.10e-183

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAGCGGCGGCGTCGATTCCGCCGTCGCGGCCGCCCGGGCCGTCGACGCGGGTCATGACGTCGTCGGTGTGCACCTCGCGCTCTCGCGCGCGGGCGGGGCGCTGCGCACCGGCAGCCGCGGGTGCTGCACGATCGAGGACGCGATGGATGCCCGGCGCGCGGCCGACCTCCTCGGCATCCCGTTCTACGTGTGGGATTTCTCCGAGCGATTCCGTGCCGACGTCATCGACGACTTCGTCAGCGAGTACCAGGCGGGACGCACCCCGAATCCGTGCATGCGCTGCAACGAGAAGATCAAGTTCGCGGCGCTCCTGGAGCGCGCCGTCGAGCTCGGCTTCGATGCCGTGTGCACGGGACACTACGCGACGCTCGTCGACGGGCCCGAGGGGCGCGAGCTACACCGCGCGAGCGACGAGGCCAAGGACCAGTCCTACGTCCTCGGGGTCCTCACCGCCGAGCAGTTGGCGCACACGATGTTCCCGCTCGGCGACACGCCGTCGAAGGCGCTCGTGCGCGCCGAGGCCGCGAAGCGCGGGCTCACGGTCGCGCAGAAGCCCGACAGCCACGACATCTGCTTCATCCCCGACGGTGACACGCGCGGCTGGCTCGCGGAGAAGGTCGGCGCGGAGCGCGGCGAGATCCTCGATCAGTCGGGCGCCGTCGTGGGCCGGCACGAGGGGGCGCACGCGTACACGGTGGGTCAGCGCCGCGGGTTGTCTCTCGGCGTTCCCGCGCCCGACGGCAGGCCGCGGTTCGTGCTGGAGGTCCGTCCCGTCTCGAACACCGTCGTGGTCGGCCCGAAGGAGGCTCTCGCGACGGCGGAGATCGGGGGCGTCCGGCTGAGCTGGGCGGGGCGCGCGCCCCGGGAGCGCTCGTTCGCGTGCCACGTGCAGATCCGGGCGCACGCCGATCCCGTGCCCGCATACGCGCAGTGGTCGGATGCCGGGCTCACCGTCACCCCGGAGACGCCGTTCGACGGCGTCGCACCGGGGCAGACGGCCGTTCTCTACGACGGCACGCGCGTGATCGGGCAGTTCACGATCGACCGGACGGTCTCGGCCGTGCCGGCTCTCGCGTAG
PROTEIN sequence
Length: 360
MSGGVDSAVAAARAVDAGHDVVGVHLALSRAGGALRTGSRGCCTIEDAMDARRAADLLGIPFYVWDFSERFRADVIDDFVSEYQAGRTPNPCMRCNEKIKFAALLERAVELGFDAVCTGHYATLVDGPEGRELHRASDEAKDQSYVLGVLTAEQLAHTMFPLGDTPSKALVRAEAAKRGLTVAQKPDSHDICFIPDGDTRGWLAEKVGAERGEILDQSGAVVGRHEGAHAYTVGQRRGLSLGVPAPDGRPRFVLEVRPVSNTVVVGPKEALATAEIGGVRLSWAGRAPRERSFACHVQIRAHADPVPAYAQWSDAGLTVTPETPFDGVAPGQTAVLYDGTRVIGQFTIDRTVSAVPALA*