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SCNpilot_expt_500_bf_scaffold_7518

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7518_1
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..778
DNA (777bp) protein (259aa)
AMP-binding domain-containing protein (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-binding protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A5A94
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_expt_500_bf_scaffold_7518_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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958..2490
DNA (1533bp) protein (511aa)
fadD; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain acyl-CoA synthetase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9B3_9MICO
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EPD83130.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_7518_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2497..3906)
DNA (1410bp) protein (470aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ligA; NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=2 Tax=Microbacterium RepID=H8E4I4_9MICO
SCNpilot_expt_500_bf_scaffold_7518_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4821..5900)
DNA (1080bp) protein (360aa)
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
thiouridylase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003801BDC
SCNpilot_expt_500_bf_scaffold_7518_5
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5928..7100)
DNA (1173bp) protein (391aa)
cysteine sulfinate desulfinase/cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371F864
Cysteine sulfinate desulfinase/cysteine desulfurase {ECO:0000313|EMBL:EZP29843.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_7518_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7161..8240
DNA (1080bp) protein (360aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
type II secretory pathway, pullulanase PulA; K02438 glycogen operon protein GlgX [EC:3.2.1.-]
Glycogen debranching enzyme GlgX n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A346_9MICO
Displaying 6 items

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