ggKbase home page

SCNpilot_expt_500_bf_scaffold_15945_3

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(2283..3881)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCZ9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 340.0
  • Bit_score: 560
  • Evalue 1.70e-156
  • rbh
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:EAT08741.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 340.0
  • Bit_score: 560
  • Evalue 2.40e-156
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9 similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 340.0
  • Bit_score: 542
  • Evalue 1.20e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. SKA58 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGTTCCGCAGACCTTCCATTCGCTACGGACAGACACCAGAACCCGTCACGCCATATCAGCGTGCCGCCCAGGCGTGGGACGACCGCATCGGCTCCGCGCGGGTGCAGGCGCGTTCCTGGCGAATGGCTTTCTTCGGCGCGCTGGCCCTCTCGGGCGGACTTACCGCCGGCCTCGTCTGGCAATCGGCGCGTGGACATATCGTCCCCTGGGTGGTCGAGGTCGATCGGCTGGGTGAAGCACAGGCGGTCGCTCCGGCCGAAGCCGGTTATAGACCGACCGACCCGCAGATCGCGTTCCATCTCGCGCGCTTCATCGAACAGGTGCGCGCGATCCCCGCCGATCCGGTCATCATCCGCCAGAACTGGCTGCGCGCCTATGACTTCACCACCGACAAGGGCGGGCAGGCGCTGAGCGATTACGCGCGGTCGAACGATCCGTTCGCCAATGTCGGCAGGGTCCAGGTCGCGGTGGACGTGTCGAGCGTCATCCGCGCCTCGCCCGACAGCTTCCGCGTCGCCTGGACCGAGCGCCAAGAACCCGCTCGGCCTGTTCGTCAACGCCATCAACTGGAGCAAGGAGCTGTCGCAATGACCCGGCTGTCCATCCACCACGTCGCCAGCGCGGTAATGCTGTTGTCCGCATCCGCACTCGGCGCCTGCTCCACCACATCGGCGAAGACGCCCGATGCCGGCAAGGTCGAGATCGCCGCGTCCCCGGCGCCAGAGCCGCCGCGCGCCGTCGAGGTGGTGACGGTCCCCGAGCCGCTGCCGCTGCCCGGCCAGTTGAAGCCGGTCACGGCAGGCGCGCGGCGTCCCGAGTCCACCGATCCGCGCCAGCGCATCGGCGCGGCCAACGCCGCCGCCCGCGTCCAGCCCACCCGCGACGGTTATGTGAACGCCATCCAGCAATATCCGTGGACCGAGGGTGCGCTCTATCAGGTCTATGCCGCGCCCGGCCAGGTGACGGACATCGCATTGCAGGAAGGCGAACAGCTTGTCGGGCCGGGGCCGGTCGCGGCGGGCGACACCGTGCGCTGGATCATCGGCGACACGGTGAGCGGCGCCGGTCCCACGGCGCGCGTGCATATCCTGGCAAAGCCCACCCGGCCCGACATCGGCACGAACCTCGTCATCAACACCGACCGGCGCACCTATCATCTCGAACTGCGAGCGACGCCATCGACCTACATGGCATCGGTAAGCTGGACCTATCCGCAGGATGCGCTGATCGCCTTGCGCGGGGCCAACGCTGCCGCCGCATCCGCCGCCCCTGTGGCGAGCGGGCTCGATCTCGCCGCGCTCAACTTCCGTTACCGGATCGAGGGCGGTCGTGTGCCATGGAAGCCCGTCCGCGCCTTCGACGATTCCGCCCAGGTGTTCATCGAGTTTCCTCACCAGATCGCGCAGGGCGAGATGCCGCCGTTGTTCGTGACCGGCGCGGCGGGGGATGCCGAACTGGTCAACTACCGCGTGCAGGGCCGCTACATGGTGGTGGACCGGCTGTTCGCCGCCGCCGAGCTGCGTCTGGGTGACAAGCGCAGCGAGCAGCGCGTCCGCATCGTGCGCGACGGGGCGGAACCGCGCCGCAGGGGGCGGTGA
PROTEIN sequence
Length: 533
MFRRPSIRYGQTPEPVTPYQRAAQAWDDRIGSARVQARSWRMAFFGALALSGGLTAGLVWQSARGHIVPWVVEVDRLGEAQAVAPAEAGYRPTDPQIAFHLARFIEQVRAIPADPVIIRQNWLRAYDFTTDKGGQALSDYARSNDPFANVGRVQVAVDVSSVIRASPDSFRVAWTERQEPARPVRQRHQLEQGAVAMTRLSIHHVASAVMLLSASALGACSTTSAKTPDAGKVEIAASPAPEPPRAVEVVTVPEPLPLPGQLKPVTAGARRPESTDPRQRIGAANAAARVQPTRDGYVNAIQQYPWTEGALYQVYAAPGQVTDIALQEGEQLVGPGPVAAGDTVRWIIGDTVSGAGPTARVHILAKPTRPDIGTNLVINTDRRTYHLELRATPSTYMASVSWTYPQDALIALRGANAAAASAAPVASGLDLAALNFRYRIEGGRVPWKPVRAFDDSAQVFIEFPHQIAQGEMPPLFVTGAAGDAELVNYRVQGRYMVVDRLFAAAELRLGDKRSEQRVRIVRDGAEPRRRGR*