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SCNpilot_expt_500_bf_scaffold_15945

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_15945_1
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1176
DNA (1176bp) protein (392aa)
transposase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C7FD
ISsp1 transposase
Putative transposase {ECO:0000313|EMBL:KFG88641.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
SCNpilot_expt_500_bf_scaffold_15945_2
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1159..2283)
DNA (1125bp) protein (375aa)
Conjugation TrbI-like protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCZ8_9SPHN rbh
Conjugation TrbI-like protein {ECO:0000313|EMBL:EAT08742.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 rbh
SCNpilot_expt_500_bf_scaffold_15945_3
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2283..3881)
DNA (1599bp) protein (533aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCZ9_9SPHN rbh
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:EAT08741.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
SCNpilot_expt_500_bf_scaffold_15945_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3888..4925)
DNA (1038bp) protein (346aa)
P-type conjugative transfer protein TrbL n=2 Tax=Sphingomonas wittichii RepID=A5VCM7_SPHWW
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ABQ70043.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Displaying 4 items

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