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SCNpilot_expt_500_bf_scaffold_14600_3

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(5231..6439)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9R6_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 407.0
  • Bit_score: 426
  • Evalue 2.90e-116
  • rbh
RNA polymerase sigma factor rpoD; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 407.0
  • Bit_score: 426
  • Evalue 9.10e-117
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 407.0
  • Bit_score: 426
  • Evalue 4.10e-116

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGACCCACCCGCTCTCCCCCCAGAAGCGTGATAGACCGGCCGACGTGTCGCGTGAGCCGACTGTGAAGCGTCCCCAGCAGGGGAAGACCACCGCGCAGGGCAAGGCCCGCGGTGCCGGAAGGGGCAAGGGCTCCGAGTCGCCGAGCGATTCGGAGGAGACCAAGCCCAGGGAAGAGGACGACGAGGAGGCCACCGAGCGCGACTCCGAGCCCGCTGGGGTGGACGACGAGATCGCTGGGGCCGAGGCTGACGACGACACGGACGCGTTCGCCGAGCCGAGCGAGGACGAAGGCGAGCGCGAATCGGTCGCCCACTCCGGACCGCTGTCGAAACCGATGTCGAGCGGCTCGATGGAGCGGCTCGACCCGATGGCCGCTTACCTCCGCGAGGTCCAGCGTCATCCGCTGCTCACGCCGGAGCAGACGCACGAGCTGGCAGCGAAGTTCGTCCAGACGCAGGACCCCGCGATCGCGGCCCAGCTCGTCACGGCGAACCTGCGCCTCGTGGTCAAGATCGCCTACGAGTACCGTCGCGCCTACAAGAACATCATGGACCTCGTGCAGGAGGGCAACATCGGCCTCATGCAGGCGGTCAAGCGGTACGACCCGTACCGCGGCGTGAAGCTCTCGAGCTACGCGGCCTGGTGGATCCGCGCCTACATCCTGAGGTTCATCCTCAACAACTGGCGCCTCGTGAAGCTGGGGACGACCCAGGCGCAGCGAAAGCTGTTCTTCAACCTTCGGAAGAAGCGGGCCGAGCTCCAGGCGATGGGCGTCGATCCGACCAACGCCGAGATCGCCAAGCACCTCAACGTCCCCGAGAGCGACGTCGCCGAGATGGACGTGCGCCTCGCCCAGAGCGAAAAGTCGCTCGACGCTCCCGTCGGGGACGCGGACGGCCGCGCGATCGCCAAGGTCGACATGATGCCCGCCGCCGGCGCGGGCCCCGAGACGCAGATGGCCGACGAGGAGCTCCAGTCGCTCCTCAAGGACAAGCTCGCCGAGTTCCGCAAGACCCTCGCGGGCAAGGAGAAGGACGTCGCCATCTTCGACATGCGCCTCGTCGCCGACGATCCGCTCACGCTCCAGGACCTGGGCGACAAGTTCGGGATCTCGCGCGAGCGTGTCCGCCAACTCGAGCAGCGCCTGCTCGCCCGCCTCCGCGATTATCTGAAGCGCGAGATGGGCGACGCGACCGATTCGCTCTGA
PROTEIN sequence
Length: 403
MTHPLSPQKRDRPADVSREPTVKRPQQGKTTAQGKARGAGRGKGSESPSDSEETKPREEDDEEATERDSEPAGVDDEIAGAEADDDTDAFAEPSEDEGERESVAHSGPLSKPMSSGSMERLDPMAAYLREVQRHPLLTPEQTHELAAKFVQTQDPAIAAQLVTANLRLVVKIAYEYRRAYKNIMDLVQEGNIGLMQAVKRYDPYRGVKLSSYAAWWIRAYILRFILNNWRLVKLGTTQAQRKLFFNLRKKRAELQAMGVDPTNAEIAKHLNVPESDVAEMDVRLAQSEKSLDAPVGDADGRAIAKVDMMPAAGAGPETQMADEELQSLLKDKLAEFRKTLAGKEKDVAIFDMRLVADDPLTLQDLGDKFGISRERVRQLEQRLLARLRDYLKREMGDATDSL*