ggKbase home page

SCNpilot_expt_500_bf_scaffold_25340_4

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 1156..1404

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=2 Tax=Waddlia chondrophila RepID=D6YS00_WADCW similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 79.0
  • Bit_score: 132
  • Evalue 2.30e-28
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_bf_scaffold_25340_5]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 1.10e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Neochlamydia sp. EPS4 → Neochlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 249
ATGGGACAAAAAACTAATCCAATTGGATTCCGCCTCATTCGCAATAAAAAATGGCGTTCAAAATGGTACGCGAATAAGCAAGAATTCGGAAACTTACTCGTTGAAGATCAAAAGATCCGCGAGTATTTAATGAAAAAACCTCAATGCCAAGGAACCTCGCAAATTAAAATTCGCCGTATGAGCGAAAAAATTGAGGTGACTATATGCACAGCAAGACCTGGTATGGTAATTGGTAGTATTACGCAATGA
PROTEIN sequence
Length: 83
MGQKTNPIGFRLIRNKKWRSKWYANKQEFGNLLVEDQKIREYLMKKPQCQGTSQIKIRRMSEKIEVTICTARPGMVIGSITQ*