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SCNpilot_expt_500_bf_scaffold_25340

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_25340_1
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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2..529
DNA (528bp) protein (176aa)
50S ribosomal protein L2 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RL2_PARUW
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
SCNpilot_expt_500_bf_scaffold_25340_2
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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532..813
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1T4_PARAV
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
SCNpilot_expt_500_bf_scaffold_25340_3
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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810..1151
DNA (342bp) protein (114aa)
50S ribosomal protein L22 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RL22_PARUW
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
SCNpilot_expt_500_bf_scaffold_25340_4
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1156..1404
DNA (249bp) protein (83aa)
30S ribosomal protein S3 n=2 Tax=Waddlia chondrophila RepID=D6YS00_WADCW
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_bf_scaffold_25340_5].
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
SCNpilot_expt_500_bf_scaffold_25340_5
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1385..1780
DNA (396bp) protein (132aa)
30S ribosomal protein S3 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1T2_PARAV
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
SCNpilot_expt_500_bf_scaffold_25340_6
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1782..2174
DNA (393bp) protein (131aa)
50S ribosomal protein L16 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RL16_PARUW
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
SCNpilot_expt_500_bf_scaffold_25340_7
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


2185..2388
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=2 Tax=Waddlia chondrophila RepID=D6YRZ8_WADCW
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
SCNpilot_expt_500_bf_scaffold_25340_8
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


2413..2652
DNA (240bp) protein (80aa)
30S ribosomal protein S17 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RS17_PARUW
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_expt_500_bf_scaffold_25340_9
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


2682..3050
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RL14_PARUW
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
SCNpilot_expt_500_bf_scaffold_25340_10
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


3067..3360
DNA (294bp) protein (98aa)
50S ribosomal protein L24 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXK2_PARAV
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
Displaying 10 items

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