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SCNpilot_expt_500_bf_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 273 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_78_1
unknown

Not on your lists

3..191
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_78_2
unknown

Not on your lists

206..775
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_78_3
unknown

Not on your lists

772..1236
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_78_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1592..2557
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y456_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU05499.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_500_bf_scaffold_78_5
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2654..5263
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HZC4_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ60605.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_78_6
unknown

Not on your lists

comp(5766..5981)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_78_7
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6021..7754)
DNA (1734bp) protein (578aa)
OmpA/MotB domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SES4_PEDSD rbh
OmpA/MotB domain-containing protein rbh
OmpA/MotB domain protein {ECO:0000313|EMBL:ADY52990.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_500_bf_scaffold_78_8
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8061..8936
DNA (876bp) protein (292aa)
Pirin domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQ48_EMTOG rbh
Pirin domain protein rbh
Pirin domain protein {ECO:0000313|EMBL:AFK01801.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_expt_500_bf_scaffold_78_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8975..9655)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000379C431
Phospholipid phosphatase {ECO:0000313|EMBL:KIC94621.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_78_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9717..11801)
DNA (2085bp) protein (695aa)
Sulfatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF6_NIAKG rbh
sulfatase rbh
Sulfatase {ECO:0000313|EMBL:AEW02802.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_78_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11866..13152)
DNA (1287bp) protein (429aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3X3_HALH1 rbh
integral membrane sensor signal transduction histidine kinase rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEE49690.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_500_bf_scaffold_78_12
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13149..13817)
DNA (669bp) protein (223aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3X4_HALH1
Cell cycle response regulator CtrA {ECO:0000313|EMBL:CEJ69305.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
winged helix family two component transcriptional regulator
SCNpilot_expt_500_bf_scaffold_78_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13925..14827
DNA (903bp) protein (301aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD8_NIAKG rbh
flavin reductase domain-containing FMN-binding protein rbh
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:AEW02784.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_78_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15017..15733)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG16_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57999.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_78_15
unknown

Not on your lists

15880..16329
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_78_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16394..17944
DNA (1551bp) protein (517aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] rbh
lysyl-tRNA synthetase n=1 Tax=Niabella aurantiaca RepID=UPI0003665B16 rbh
SCNpilot_expt_500_bf_scaffold_78_17
unknown

Not on your lists

comp(18030..19715)
DNA (1686bp) protein (562aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_78_18
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19883..20677
DNA (795bp) protein (265aa)
Regulatory protein LuxR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3I6_PEDHD
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ACU03265.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_500_bf_scaffold_78_19
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20656..21471
DNA (816bp) protein (272aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7U2_9SPHI
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EHQ30428.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_500_bf_scaffold_78_20
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21551..21829)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HRL8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAZ82486.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_78_21
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(22038..22859)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FD459 rbh
hypothetical protein rbh
Predicted protein {ECO:0000313|EMBL:EDO26062.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_500_bf_scaffold_78_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23238..24227)
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC8_NIAKG
aldo/keto reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_500_bf_scaffold_78_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24301..24870)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373F4FC
Uncharacterized protein {ECO:0000313|EMBL:AHF17832.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_78_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25050..26483)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT02_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17831.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane protein
SCNpilot_expt_500_bf_scaffold_78_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26455..27183)
DNA (729bp) protein (243aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
putative Baf family transcriptional acitvator; K03525 type III pantothenate kinase [EC:2.7.1.33] rbh
Baf family transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00036C2A72 rbh
SCNpilot_expt_500_bf_scaffold_78_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27226..27867)
DNA (642bp) protein (214aa)
Peptidase S16 lon domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD2_NIAKG
Peptidase S16 {ECO:0000313|EMBL:KIC91172.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
peptidase S16 lon domain-containing protein; K07157
SCNpilot_expt_500_bf_scaffold_78_27
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27972..28940
DNA (969bp) protein (323aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B2E26 rbh
Transporter {ECO:0000313|EMBL:KIC95156.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_500_bf_scaffold_78_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28968..30101
DNA (1134bp) protein (378aa)
UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase [EC:5.4.99.9] rbh
UDP-galactopyranose mutase {ECO:0000313|EMBL:ACT94572.1}; EC=5.4.99.9 {ECO:0000313|EMBL:ACT94572.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
UDP-galactopyranose mutase n=1 Tax=Segetibacter koreensis RepID=UPI0003740A1F rbh
SCNpilot_expt_500_bf_scaffold_78_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30106..31041
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GF56_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA88067.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
glycosyltransferase
SCNpilot_expt_500_bf_scaffold_78_30
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31061..31867
DNA (807bp) protein (269aa)
Glycosyl transferase, family 2 n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB14_9SPHI
Two-domain glycosyltransferase {ECO:0000313|EMBL:GAE82615.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
family 2 glycosyl transferase
Displaying items 1-30 of 273 in total

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