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SCNpilot_expt_500_bf_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 217 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_106_1
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..1001
DNA (999bp) protein (333aa)
Helicase C-terminal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZW3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65854.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
helicase
SCNpilot_expt_500_bf_scaffold_106_2
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1204..2148
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNU1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57588.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_106_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2294..2812
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXG7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57587.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_106_4
unknown

Not on your lists

2817..3134
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_106_5
unknown

Not on your lists

comp(3113..3313)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_106_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3255..4616)
DNA (1362bp) protein (454aa)
RagB/SusD family protein n=1 Tax=Pedobacter agri RepID=UPI00029ACF57 rbh
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AHF16952.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RagB/SusD family protein
SCNpilot_expt_500_bf_scaffold_106_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4635..7859)
DNA (3225bp) protein (1075aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM0_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ25091.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-dependent receptor
SCNpilot_expt_500_bf_scaffold_106_8
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7882..8979)
DNA (1098bp) protein (366aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF49_SPHS2
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADZ76742.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_106_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9301..9693
DNA (393bp) protein (131aa)
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF51_SPHS2
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADZ76744.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_106_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9702..10088
DNA (387bp) protein (129aa)
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF52_SPHS2
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADZ76745.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_106_11
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10105..10467
DNA (363bp) protein (121aa)
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF53_SPHS2
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADZ76746.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_106_12
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10471..10872
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000373CE41
Uncharacterized protein {ECO:0000313|EMBL:KGE13696.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_106_13
unknown

Not on your lists

11097..11546
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_106_14
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11609..12613
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Bergeyella zoohelcum RepID=K1LMK1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKB55926.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_106_15
unknown

Not on your lists

12642..12806
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_106_16

Not on your lists

12821..13153
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN63530.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_500_bf_scaffold_106_17
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13514..15514)
DNA (2001bp) protein (667aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZC4_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDS98960.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_106_18
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15622..15954)
DNA (333bp) protein (111aa)
Putative transcriptional regulator n=1 Tax=Flavobacterium sp. CF136 RepID=J2JC02_9FLAO
Integrase {ECO:0000313|EMBL:KEQ30176.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
putative HTH-type transcriptional activator HxlR
SCNpilot_expt_500_bf_scaffold_106_19
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16067..16444
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C728_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL65586.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_106_20
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16507..16896
DNA (390bp) protein (130aa)
Ketosteroid isomerase-like protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2SJF7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEQ30177.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein; K06893
SCNpilot_expt_500_bf_scaffold_106_21
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17041..17886
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003700C09 rbh
Beta-lactamase {ECO:0000313|EMBL:AKD05733.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Zn-dependent hydrolase
SCNpilot_expt_500_bf_scaffold_106_22
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17971..18939
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITY6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99229.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
sodium:bile acid symporter family protein
SCNpilot_expt_500_bf_scaffold_106_23
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18941..20257)
DNA (1317bp) protein (439aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6W1_PEDSD
Relaxase/mobilization nuclease family protein
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:ADY52221.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_500_bf_scaffold_106_24
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20254..20697)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FW49_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07278.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_106_25
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21404..22171
DNA (768bp) protein (256aa)
conjugal transfer protein TraA n=1 Tax=Empedobacter brevis RepID=UPI000368C72F
Conjugal transfer protein TraA {ECO:0000313|EMBL:AIM37856.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
chromosome partitioning ATPase
SCNpilot_expt_500_bf_scaffold_106_26
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22184..22555
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=C2G235_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK33908.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_106_27
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22569..22859
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZC9_9FLAO
TraB protein {ECO:0000313|EMBL:BAP31934.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_106_28
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22871..23143
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5V1_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80116.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_106_29
unknown

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comp(23040..23243)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_106_30
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23363..23884
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZIB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY50993.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
MT-A70 family protein
Displaying items 1-30 of 217 in total

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