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SCNpilot_expt_500_bf_scaffold_443_12

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 9079..9990

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031CFAAA similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 273.0
  • Bit_score: 173
  • Evalue 2.50e-40
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFG91766.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.5
  • Coverage: 308.0
  • Bit_score: 118
  • Evalue 1.80e-23
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 211.0
  • Bit_score: 88
  • Evalue 3.40e-15

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Taxonomy

Sphingobium herbicidovorans → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCTGGAATCACTCTGAGGCAACTCGAGATTTTTGTGCAGATCGTCGATTTGGGCAGCTTTCGGCGCTGCGCAGAAGAAATTGGCATCTCACAGGTTGCGATCACCGACCACATCCAAGGGCTTGAACGCCAGATCGGCATTTCCCTGTTCGACCGCAAACCTGGAGCCGCCGCGCGCGTCACGGCAATGGGCGAAAAAGTCTATTTGCGGGCAATGCGCATACTGAGTGAAGTCAACGCGTTGGAATGGGAATGCACACCGGACCGACAAGGCGGCCCCAAGCGGCGTATTACCCTAGCCTCGCAGGGATTTGTTTTGCGGGATCTCTATGAGGAATTCGACCTGTTCCGCGCCGACCACCCTCGGGTAAGCTTGGCAATACGGCTGGAGCCGCTGGGCTATGGAGCGATCCGCGATCTTTTGCAGGAAAACCGGATCGACCTTGCTTATATTATGTCGGTAGACGATCCAGGTCTGTTTCCGTCGCATTTCGTGAGTTACGAGCATTTGGCGGTCTATGTCGGGCCGGACCATCCACTGGCGGGCGAAACCTCGGTGACAGCCGCAGACCTGCGTCCCTATCGCACAATCCGGCTGGGCCCCAATGGCCATCTGCGTGCCGCAGTCGACGAAGTCCTGCTGCGTTGCGGACTGGGCATGGTAGGAACGGGCTTGGAAACCGACGATTATGGGTTAATTCTCAATACACTGCAGCGCACACCCTGCTTCGCGGTCATGCTCAAGGGGCAACCCGACGAAGCCCTCCCCCACGGTGGACTCGTACCGCTGCCGGTCAGCTTTCCGGTCCCCCCTCTGCAATTGCGGGAGGCTTTTTCCGCGATTGGCGCTCGCGATTCCACTGTGCTGAACCTGGCCCAACGCATCAGGGAGAGGCAAGAGATGCGCTAG
PROTEIN sequence
Length: 304
MAGITLRQLEIFVQIVDLGSFRRCAEEIGISQVAITDHIQGLERQIGISLFDRKPGAAARVTAMGEKVYLRAMRILSEVNALEWECTPDRQGGPKRRITLASQGFVLRDLYEEFDLFRADHPRVSLAIRLEPLGYGAIRDLLQENRIDLAYIMSVDDPGLFPSHFVSYEHLAVYVGPDHPLAGETSVTAADLRPYRTIRLGPNGHLRAAVDEVLLRCGLGMVGTGLETDDYGLILNTLQRTPCFAVMLKGQPDEALPHGGLVPLPVSFPVPPLQLREAFSAIGARDSTVLNLAQRIRERQEMR*