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SCNpilot_expt_500_bf_scaffold_282_11

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(15207..16691)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000364D8A6 similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 499.0
  • Bit_score: 728
  • Evalue 4.40e-207
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU74700.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 499.0
  • Bit_score: 728
  • Evalue 6.10e-207
oligogalacturonide transporter similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 489.0
  • Bit_score: 468
  • Evalue 2.00e-129
  • rbh

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGGCGCAACCGGCGGCAAGACCGGTCCGTTTGGTCAATTACCTGGCCTATGGCGCGAATGACGTGCTGGGCGCGGGGTCGATGGCGGTGATCTCGGCATGGGTGCTGATCTTCTACACGCGGTTTTGCGGCCTCTCAGCCGGACAGGCTGCGCTGATCTTTGCCGTGGCGCGCATTCTCGACGCCTTTGTCTCGCCCACGATCGGGCATATTTCGGACCATTTCGACCGGCACGCGCTGGGGCGGCGGTTCGGGCGGCGGCGGTTTTTCGTGCTGGCCGCCATTCCCCTGCTGCCAACATTCGCGCTGATGTGGCTGCCGGGTCAGACCTTTTGGTATTACCTTGTTTCCTATGTGCTGTTCGAACTGACCTATGCGCTGGAGATCATCCCCTATGAAACGCTGGCCGCCGAAATGGCCAGCGACTTTGCCACCAAGGCCAAGTTTGCCGGGGTGCGCATTCTGTTTGCGCAAGGGTCGGCGATTCTGGCCGGTTTCCTGCCGCTCTGGCTGATCAACTGGCTGGGGCGCGACAGTGCGAACACGTTCCTCATCATGGGGGCGATCTTTGCCGCGCTGTTCATGGCGACGGCGGGCTTCCTCTATGCCTTCAGTTGGGAACGCCAGCGCCCCACGCCGCCCAAGCCCGCCGCCGGATCCCCGCTGCTGCATCTGTGGCGCAATCTGTCGTCCACCTTGCGCATTCGGGCGTTCCGGCTGCATCTGGGCATGTATCTGGGCGGATATATCTCGCAGGACATTTTCAACGCGGCTTTCACCTTCTTCGTGATCTTTGCGCTGGCCGGATCGACGCAGGCGGCCTCCGCCCTGCTGGGCACGATGTATATTGTGCAATTGGGCGCGGTGATGCTGGCCATCCGCATGGCGCTGCGCTCCAGCCCCGCGCTGGCCTATCGCATGGCGGCGGCGTGTTTCGCGCTGGGCGTGGCGGCGCTGCTGGCGCTGTGGTGGGCGGGGCTGCCTGCCGCATCGGGGTGGATCTGGATCGGCATGGGGCTGGTGGGCCTCGGGCGCGGGGCGCTCAACTACATTCCATGGGCCACCTACAATTACATGGCCGATGTGGATGAGATCGTCACCGGTCGCCGCCGCGAAGGCTCCTTTGCGGGCGTGATGACTTTTATCCGCAAGGCAACACAGGCCGCCGCCGTGGCGCTGGTGGGCCTGTTGATGGATGCGGGCGGTTTCGTGCCCAAGGCGGACGTACAGAGCCATGGCGCGGTGCTGACGCTGGTGCTGGTGATGGGCATCGGCACATGGGCGATGCTGGGCTTTGGTATCGCCGTCTCGCGCCGCTTCCGTCTCAGCCGCGCCACGCATGACGTGCTGATGGGCGAGATCGAACATCTGCGCGGCGGCGGGCGCGAACCGACCAGCCCCCATGCGCGCGAAGTGGTTCAGGACCTGACAGGCTGGGACTATGAGAGCCTGTGGGGCAACAATCCGGTGGGAGGAAAATTGTGA
PROTEIN sequence
Length: 495
MAQPAARPVRLVNYLAYGANDVLGAGSMAVISAWVLIFYTRFCGLSAGQAALIFAVARILDAFVSPTIGHISDHFDRHALGRRFGRRRFFVLAAIPLLPTFALMWLPGQTFWYYLVSYVLFELTYALEIIPYETLAAEMASDFATKAKFAGVRILFAQGSAILAGFLPLWLINWLGRDSANTFLIMGAIFAALFMATAGFLYAFSWERQRPTPPKPAAGSPLLHLWRNLSSTLRIRAFRLHLGMYLGGYISQDIFNAAFTFFVIFALAGSTQAASALLGTMYIVQLGAVMLAIRMALRSSPALAYRMAAACFALGVAALLALWWAGLPAASGWIWIGMGLVGLGRGALNYIPWATYNYMADVDEIVTGRRREGSFAGVMTFIRKATQAAAVALVGLLMDAGGFVPKADVQSHGAVLTLVLVMGIGTWAMLGFGIAVSRRFRLSRATHDVLMGEIEHLRGGGREPTSPHAREVVQDLTGWDYESLWGNNPVGGKL*