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SCNpilot_expt_500_bf_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_53_1
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

199..2274
DNA (2076bp) protein (692aa)
Uncharacterized protein n=2 Tax=Burkholderia pseudomallei RepID=U5UX56_BURPE rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ACQ97222.1}; TaxID=536230 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR346.;"
SCNpilot_expt_500_bf_scaffold_53_2
unknown

Not on your lists

2848..3126
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_3
unknown

Not on your lists

3395..4423
DNA (1029bp) protein (343aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_4
unknown

Not on your lists

4482..5510
DNA (1029bp) protein (343aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_5
unknown

Not on your lists

6023..6274
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_6
unknown

Not on your lists

6689..6925
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_7
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7333..8226
DNA (894bp) protein (298aa)
Uncharacterized protein {ECO:0000313|EMBL:ADN18150.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
SCNpilot_expt_500_bf_scaffold_53_8
unknown

Not on your lists

comp(8288..8740)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_9
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8967..10883)
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F7F09 rbh
Sulfatase-modifying factor protein {ECO:0000313|EMBL:KJV32041.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_53_10
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10967..12064
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000378E383 rbh
Ribonuclease D {ECO:0000313|EMBL:KJV32042.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
ribonuclease D
SCNpilot_expt_500_bf_scaffold_53_11
unknown

Not on your lists

12407..12604
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_12
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12691..15207
DNA (2517bp) protein (839aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I; K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
Bifunctional aspartokinase I/homoserine dehydrogenase I n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UR39_PSEUP
Bifunctional aspartokinase I/homoserine dehydrogenase I {ECO:0000313|EMBL:AER55850.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_expt_500_bf_scaffold_53_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15207..16130
DNA (924bp) protein (308aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] rbh
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F2B69 rbh
SCNpilot_expt_500_bf_scaffold_53_14
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16127..17422
DNA (1296bp) protein (432aa)
thrC; threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
threonine synthase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A586
Threonine synthase {ECO:0000313|EMBL:AJC44591.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_expt_500_bf_scaffold_53_15
unknown

Not on your lists

comp(17803..18276)
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(18416..20068)
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4384
VBCS repeat-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
SCNpilot_expt_500_bf_scaffold_53_17
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20255..21580
DNA (1326bp) protein (442aa)
ugpQ; glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46); K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] rbh
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SLF2_HAHCH rbh
Uncharacterized protein {ECO:0000313|EMBL:KIJ71573.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SCNpilot_expt_500_bf_scaffold_53_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22217..24337)
DNA (2121bp) protein (707aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WIX2_9GAMM
Peptidase S9 {ECO:0000313|EMBL:GAN45244.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
SCNpilot_expt_500_bf_scaffold_53_19
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24406..26340)
DNA (1935bp) protein (645aa)
peptide transporter n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B7BA95 rbh
Peptide transporter {ECO:0000313|EMBL:KFN45019.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
oligopeptide transporter
SCNpilot_expt_500_bf_scaffold_53_20
unknown

Not on your lists

comp(26523..27020)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_21
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27233..27628
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:EGD25369.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
SCNpilot_expt_500_bf_scaffold_53_22
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

27747..29252
DNA (1506bp) protein (502aa)
Polymorphic outer membrane protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1S2_HERA2
polymorphic outer membrane protein
Tax=RBG_16_Chloroflexi_47_49_curated
SCNpilot_expt_500_bf_scaffold_53_23
unknown

Not on your lists

comp(29449..29901)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_53_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29916..30308)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037C1DEB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF53004.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_expt_500_bf_scaffold_53_25
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30523..31182)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000362D475
Uncharacterized protein {ECO:0000313|EMBL:KFN48684.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_53_26
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31438..33258
DNA (1821bp) protein (607aa)
Amino acid/peptide transporter n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GT98_XANCT
Amino acid/peptide transporter {ECO:0000313|EMBL:ELQ08999.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
XALc; peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
SCNpilot_expt_500_bf_scaffold_53_27
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33239..34366)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D6AED4
Oxidoreductase {ECO:0000313|EMBL:EYR69900.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
FAD dependent oxidoreductase
SCNpilot_expt_500_bf_scaffold_53_28
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34566..35690
DNA (1125bp) protein (375aa)
dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DC8B79
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AEF21119.1}; Flags: Precursor;; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
SCNpilot_expt_500_bf_scaffold_53_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35779..37761)
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003765F0A
Prolyl oligopeptidase {ECO:0000313|EMBL:GAN45246.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
SCNpilot_expt_500_bf_scaffold_53_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37912..39348)
DNA (1437bp) protein (479aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C7AA2 rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying items 1-30 of 175 in total

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