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SCNpilot_expt_500_bf_scaffold_201

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_201_1
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(159..2342)
DNA (2184bp) protein (728aa)
prolyl oligopeptidase (EC:3.4.21.26); K01322 prolyl oligopeptidase [EC:3.4.21.26]
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003776A93
Uncharacterized protein {ECO:0000313|EMBL:KJH69660.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
SCNpilot_expt_500_bf_scaffold_201_2
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2466..4520)
DNA (2055bp) protein (685aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5B24F rbh
degV family protein; K07030 rbh
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_expt_500_bf_scaffold_201_3

Not on your lists

comp(4594..4911)
DNA (318bp) protein (106aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B7VDB2_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAS02616.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_bf_scaffold_201_4
unknown

Not on your lists

5390..5779
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_201_5
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5916..6611
DNA (696bp) protein (232aa)
Protein containing DUF980 n=3 Tax=mine drainage metagenome RepID=T1CLK7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFL37109.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_201_6
unknown

Not on your lists

6695..7354
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_201_7
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

7494..10223
DNA (2730bp) protein (910aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036B2476
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
SCNpilot_expt_500_bf_scaffold_201_8
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10240..12474)
DNA (2235bp) protein (745aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376B74C rbh
Putative Glycosyl transferase WbpY {ECO:0000313|EMBL:CDH45569.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
mannosyltransferase rbh
SCNpilot_expt_500_bf_scaffold_201_9
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12471..13505)
DNA (1035bp) protein (345aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JT54_BURP8
GDP-mannose 4,6-dehydratase
SCNpilot_expt_500_bf_scaffold_201_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13502..14986)
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362BC9A rbh
Uncharacterized protein {ECO:0000313|EMBL:KJB95862.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
family 2 glycosyl transferase
SCNpilot_expt_500_bf_scaffold_201_11
Paenibacillus popilliae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14983..17655)
DNA (2673bp) protein (891aa)
Predicted glycosyltransferase n=1 Tax=Paenibacillus popilliae ATCC 14706 RepID=M9LR88_PAEPP
Predicted glycosyltransferase {ECO:0000313|EMBL:GAC43756.1}; TaxID=1212764 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus popilliae ATCC 14706.;"
family 2 glycosyl transferase; K07011
SCNpilot_expt_500_bf_scaffold_201_12
unknown

Not on your lists

comp(17652..18017)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_201_13
unknown

Not on your lists

comp(18034..19389)
DNA (1356bp) protein (452aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_201_14

Not on your lists

comp(19393..19935)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1J7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72435.1}; TaxID=1256558 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
SCNpilot_expt_500_bf_scaffold_201_15
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20029..21204
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8Q2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00505.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_expt_500_bf_scaffold_201_16
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21204..21812
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4B736
Uncharacterized protein {ECO:0000313|EMBL:KFN44608.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
methyltransferase, FkbM family domain protein
SCNpilot_expt_500_bf_scaffold_201_17
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21856..22938
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5368C rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN44607.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
group 1 glycosyl transferase
SCNpilot_expt_500_bf_scaffold_201_18
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22935..24125
DNA (1191bp) protein (397aa)
putative glycosyltransferase (group 1) n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C497D rbh
Uncharacterized protein {ECO:0000313|EMBL:KIJ75148.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
group 1 glycosyl transferase
SCNpilot_expt_500_bf_scaffold_201_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24165..26420)
DNA (2256bp) protein (752aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A7F70 rbh
DNA/RNA helicase, superfamily I
SCNpilot_expt_500_bf_scaffold_201_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26436..27839
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380F47A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN44939.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_201_21

Not on your lists

comp(27864..28427)
DNA (564bp) protein (188aa)
Protein belonging to Uncharacterized protein family UPF0114 n=2 Tax=mine drainage metagenome RepID=T1AID0_9ZZZZ
Protein belonging to Uncharacterized protein family UPF0114 {ECO:0000313|EMBL:EQD60261.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_201_22
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28576..29622)
DNA (1047bp) protein (349aa)
saccharopine dehydrogenase (EC:1.5.1.7)
Uncharacterized protein {ECO:0000313|EMBL:KFN48765.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Uncharacterized protein id=3038401 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
SCNpilot_expt_500_bf_scaffold_201_23
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29619..30425)
DNA (807bp) protein (269aa)
short-chain dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3ECBE
Uncharacterized protein {ECO:0000313|EMBL:KFN45849.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
short chain dehydrogenase
SCNpilot_expt_500_bf_scaffold_201_24
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30575..31336
DNA (762bp) protein (254aa)
Short chain dehydrogenase id=3038409 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
short chain dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_expt_500_bf_scaffold_201_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31750..34494)
DNA (2745bp) protein (915aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Dyella ginsengisoli RepID=UPI00037C8D09
DNA polymerase I {ECO:0000313|EMBL:GAN44936.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_expt_500_bf_scaffold_201_26
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34845..35252
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FB4C
Protein of unknown function (DUF2782)
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_expt_500_bf_scaffold_201_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35327..36904)
DNA (1578bp) protein (526aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=1 Tax=mine drainage metagenome RepID=T1CGY7_9ZZZZ rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_expt_500_bf_scaffold_201_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37006..37317)
DNA (312bp) protein (104aa)
Fis family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000346B768
Fis family transcriptional regulator {ECO:0000313|EMBL:GAN45852.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
transcriptional activator Fis; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein
SCNpilot_expt_500_bf_scaffold_201_29
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37443..38234)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D9165C
Uncharacterized protein {ECO:0000313|EMBL:AIF45820.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Protein of unknown function (DUF3426)
SCNpilot_expt_500_bf_scaffold_201_30
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38349..39233)
DNA (885bp) protein (295aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
(LSU ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-)
ribosomal protein L11 methyltransferase n=1 Tax=Dyella japonica RepID=UPI0002D905CB
Displaying items 1-30 of 92 in total

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