name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_60_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
278..2182
|
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8F9_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35626.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2297..4021
|
phospholipase D n=1 Tax=Variovorax paradoxus RepID=UPI0003749B90
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL71990.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
phospholipase d/transphosphatidylase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4029..4940)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CIA9_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35624.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein; K09796 hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4973..7279)
|
Outer membrane receptor protein n=1 Tax=Variovorax sp. CF313 RepID=J2T1X0_9BURK
rbh
Outer membrane receptor protein {ECO:0000313|EMBL:EJL71992.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7397..7768)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KFS5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL71993.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_60_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7780..9069)
|
gumn family protein n=1 Tax=Variovorax paradoxus RepID=UPI00037BF859
rbh
gumn family protein; K09973 hypothetical protein
rbh
GumN family protein {ECO:0000313|EMBL:ADU39588.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_60_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9134..9547
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8G5_VARPE
glyoxalase/bleomycin resistance protein/dioxygenase; K06991
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADU39589.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_60_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9544..10728
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CIB3_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL71996.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10760..11734)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2T1X7_9BURK
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL71997.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_bf_scaffold_60_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11766..11978)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9A9_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU39593.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_60_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11975..13744)
|
FAD-binding monooxygenase protein; K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
rbh
FAD-dependent oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI0003721524
rbh
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:ADU39594.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_60_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13834..14613
|
Response regulator n=1 Tax=Variovorax sp. CF313 RepID=J2JVW2_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35618.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
LuxR family transcriptional regulator
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14632..15729)
|
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CIB6_9BURK
rbh
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EJL72001.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative fumarylacetoacetate (FAA) hydrolase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15731..17041
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2T1Y3_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL72002.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17124..17435
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003752434
Uncharacterized protein {ECO:0000313|EMBL:EJL72003.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_60_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17505..18608)
|
Membrane protein AbrB duplication n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9B6_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35614.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein; K07120
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18633..19508
|
Putative iron-regulated protein n=1 Tax=Variovorax sp. CF313 RepID=J3CI10_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35613.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19580..24052)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D3E10
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22911.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_60_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24143..25531)
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1Z0_VARPS
Putative protein involved in formation of curli polymers-like protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22910.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_60_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25549..26130)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037C8ADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22909.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_60_21
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26269..26673
|
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI0003663706
Uncharacterized protein {ECO:0000313|EMBL:EHP40919.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_60_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26731..28065)
|
omega amino acid--pyruvate aminotransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003706A33
rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EJL72006.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative omega-amino acid--pyruvate aminotransferase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28135..29001
|
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Formyltetrahydrofolate deformylase n=1 Tax=Variovorax sp. CF313 RepID=J2T1Y8_9BURK
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29003..29377)
|
signal peptide protein n=1 Tax=Variovorax paradoxus RepID=UPI00035CED84
Uncharacterized protein {ECO:0000313|EMBL:EJL72008.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_60_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29499..30824)
|
Lipolytic protein G-D-S-L family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9C5_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35635.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
G-D-S-L family lipolytic protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30890..34183)
|
Pyruvate carboxylase n=1 Tax=Variovorax sp. CF313 RepID=J2JVX3_9BURK
rbh
Pyruvate carboxylase {ECO:0000313|EMBL:EJL72010.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
carbamoyL-phosphate synthase l chain ATP-binding protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34194..35807)
|
AMP-dependent synthetase n=1 Tax=Variovorax paradoxus RepID=UPI00036930A6
rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJL72011.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative ligase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35893..36588
|
Transcriptional regulator, TetR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XIS2_VARPD
rbh
transcriptional regulator, TetR family
rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGU52015.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_bf_scaffold_60_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36614..37870
|
amino acid ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000382D878
rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL72013.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
extracellular ligand-binding receptor
rbh
|
|
SCNpilot_expt_500_bf_scaffold_60_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38013..41237
|
cytochrome p450; K14338 cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
rbh
Sulfite reductase, alpha subunit (Flavoprotein) n=1 Tax=Variovorax sp. CF313 RepID=J3CI18_9BURK
rbh
Sulfite reductase, alpha subunit (Flavoprotein) {ECO:0000313|EMBL:EJL72014.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|