name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_82_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..248
|
FAD linked oxidase domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6S2_VARPE
fad linked oxidase domain-containing protein
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33716.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_expt_500_bf_scaffold_82_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(543..1238)
|
Putative ABC transporter, periplasmic molybdate binding protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1M0_VARPE
ABC transporter periplasmic molybdate binding protein; K02020 molybdate transport system substrate-binding protein
Putative ABC transporter, periplasmic molybdate binding protein {ECO:0000313|EMBL:ADU36776.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_82_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1258..2151)
|
6-phosphogluconate dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00037CCB3C
rbh
putative NAD binding domain-containing phosphogluconate dehydrogenase
rbh
Putative NAD binding domain-containing phosphogluconate dehydrogenase {ECO:0000313|EMBL:AGU52714.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_bf_scaffold_82_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2177..3178)
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CZT0_VARPS
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS22330.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_82_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3190..4170)
|
Putative Bug-like extra-cytoplasmic solute receptor, TTT-family n=1 Tax=Variovorax paradoxus B4 RepID=T1XIJ9_VARPD
rbh
putative Bug-like extra-cytoplasmic solute receptor, TTT-family
rbh
Putative Bug-like extra-cytoplasmic solute receptor, TTT-family {ECO:0000313|EMBL:AGU52712.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_bf_scaffold_82_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4206..5510)
|
extradiol ring-cleavage dioxygenase class iii protein subunit b; K04099 protocatechuate 4,5-dioxygenase [EC:1.13.11.8]
rbh
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1M2_VARPE
rbh
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:ADU36778.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_82_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5526..6224)
|
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; K10218 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
rbh
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1M3_VARPE
rbh
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase {ECO:0000313|EMBL:ADU36779.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_82_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6227..7255)
|
Putative 4-oxalomesaconate hydratase n=1 Tax=Variovorax paradoxus B4 RepID=T1XJG0_VARPD
rbh
Variovorax paradoxus strain MEDvA23 contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ30894.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative 4-oxalomesaconate hydratase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7424..8701
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XIJ5_VARPD
rbh
transcriptional regulator, LysR family
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU52707.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_bf_scaffold_82_10
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8708..9157)
|
Acetyltransferase n=1 Tax=Acidovorax sp. CF316 RepID=J1ENJ1_9BURK
Acetyltransferase {ECO:0000313|EMBL:EJE53821.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
N-acetyltransferase GCN5
|
|
SCNpilot_expt_500_bf_scaffold_82_11
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(9194..9535)
|
Tetratricopeptide repeat protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YEW8_ANEAE
Strain NCTC 7096 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIV56723.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_82_12
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9666..11309)
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00036285D7
rbh
Membrane protein {ECO:0000313|EMBL:KJA11253.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
putative methyl-accepting chemotaxis protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11466..12299)
|
Putative hydrolase of the alpha/beta superfamily n=1 Tax=Variovorax sp. CF313 RepID=J3CPG8_9BURK
rbh
Putative hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:EJL75601.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative alpha/beta hydrolase family protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12447..14345
|
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Variovorax sp. CF313 RepID=J3CJ90_9BURK
rbh
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EJL72566.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
type II secretion system protein e
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14485..15312
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003756AF3
rbh
signal transduction protein
rbh
Putative signal transduction protein {ECO:0000313|EMBL:ACS20197.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_82_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15322..16167)
|
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
rbh
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Variovorax sp. CF313 RepID=J2TBU0_9BURK
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_17
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16181..17374)
|
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036CA4F3
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP42955.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17397..18356)
|
Trypsin-like serine protease with C-terminal PDZ domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2KRD5_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25212.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
|
|
SCNpilot_expt_500_bf_scaffold_82_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18456..20771)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V307_VARPE
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU38073.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_20
unknown
|
Not on your lists |
21013..21264
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AB966
|
|
SCNpilot_expt_500_bf_scaffold_82_21
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21270..21899)
|
Putative threonine efflux protein n=1 Tax=Acidovorax sp. CF316 RepID=J0UA16_9BURK
Putative threonine efflux protein {ECO:0000313|EMBL:EJE53002.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
amino acid transporter LysE
|
|
SCNpilot_expt_500_bf_scaffold_82_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21929..23608)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CP15_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL75604.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23820..24086
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K5Y6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL75605.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_82_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24271..26181
|
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6Y6_VARPE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26178..28247
|
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003649644
rbh
alpha amylase catalytic subunit
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28262..31606
|
Trehalose synthase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6Y8_VARPE
rbh
Trehalose synthase {ECO:0000313|EMBL:ADU37192.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_82_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31640..32422
|
Conserved TM helix repeat-containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6Y9_VARPE
rbh
hypothetical protein
rbh
Conserved TM helix repeat-containing protein {ECO:0000313|EMBL:ADU37193.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_82_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32464..34626
|
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Glycogen debranching enzyme GlgX n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6Z0_VARPE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34623..36491
|
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
malto-oligosyltrehalose trehalohydrolase; K01236 maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
rbh
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Variovorax sp. CF313 RepID=J3CNY1_9BURK
rbh
|
|
SCNpilot_expt_500_bf_scaffold_82_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36481..41658
|
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Malto-oligosyltrehalose synthase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6Z2_VARPE
rbh
malto-oligosyltrehalose synthase
rbh
|