name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_192_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..128
|
electron transfer flavoprotein subunit beta n=1 Tax=Variovorax paradoxus RepID=UPI00037C56B0
etfA; electron transfer flavoprotein, subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACS19990.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
143..1114
|
2-nitropropane dioxygenase NPD n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9N9_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32754.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_expt_500_bf_scaffold_192_3
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2643..4670
|
Phosphotransferase domain-containing protein n=1 Tax=Vibrio cholerae HE48 RepID=F9AYS5_VIBCL
Phosphotransferase domain-containing protein {ECO:0000313|EMBL:BAP80667.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MT-1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_192_4
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4648..4941
|
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI000361E1B9
Uncharacterized protein {ECO:0000313|EMBL:BAP80666.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MT-1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_192_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5294..5893
|
C4-dicarboxylate ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI000374D608
rbh
tripartite ATP-independent periplasmic transporter dctq component
rbh
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADU35077.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5890..7188
|
C4-dicarboxylate ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI000361A6B6
rbh
TRAP dicarboxylate transporter subunit DctM
rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ACS17487.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7283..8320
|
C4-dicarboxylate ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003817B60
rbh
TRAP dicarboxylate transporter, subunit DctP
rbh
TRAP dicarboxylate transporter, subunit DctP {ECO:0000313|EMBL:AGU48013.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_bf_scaffold_192_8
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8351..9316)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C4998
rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EPX99564.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
transcriptional regulator, AraC family
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_9
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9397..9858
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036A7F26
Uncharacterized protein {ECO:0000313|EMBL:EPX99563.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
putative tautomerase
|
|
SCNpilot_expt_500_bf_scaffold_192_10
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9878..10705
|
dienelactone hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI000371447A
rbh
Dienelactone hydrolase {ECO:0000313|EMBL:KIF81310.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10775..11752
|
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Variovorax sp. CF313 RepID=J3CEP0_9BURK
rbh
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:EJL70119.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_bf_scaffold_192_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11858..12913
|
Putative dienelactone hydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2JQN9_9BURK
rbh
Putative dienelactone hydrolase {ECO:0000313|EMBL:EJL70120.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative dienelactone hydrolase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12967..13716)
|
ABC transporter related n=2 Tax=Variovorax paradoxus RepID=C5CMI3_VARPS
rbh
ABC transporter related {ECO:0000313|EMBL:ACS17484.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_14
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13744..14412)
|
glutamate/aspartate transporter permease GltK n=1 Tax=Variovorax paradoxus RepID=UPI00035DD852
rbh
polar amino acid ABC transporter permease; K10002 glutamate/aspartate transport system permease protein
rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADX47876.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14414..15172)
|
glutamate ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036A542B
rbh
polar amino acid abc transporter, inner membrane subunit; K10003 glutamate/aspartate transport system permease protein
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:GAO20566.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_500_bf_scaffold_192_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15271..16167)
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AFAB2
rbh
amino-acid ABC transporter bindingprotein ybeJ; K10001 glutamate/aspartate transport system substrate-binding protein
Amino-acid ABC transporter bindingprotein ybeJ {ECO:0000313|EMBL:EFI60324.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
|
|
SCNpilot_expt_500_bf_scaffold_192_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16321..17793)
|
aspA; aspartate ammonia-lyase AspA (EC:4.3.1.1)
rbh
Aspartate ammonia-lyase AspA {ECO:0000313|EMBL:AGU48007.1}; EC=4.3.1.1 {ECO:0000313|EMBL:AGU48007.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
aspartate ammonia-lyase n=1 Tax=Variovorax paradoxus RepID=UPI00036D0EA4
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17969..18955)
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CMH8_VARPS
rbh
LysR family transcriptional regulator
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS17479.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19017..20459
|
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Variovorax sp. CF313 RepID=J2JMU7_9BURK
rbh
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJL69190.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_bf_scaffold_192_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20570..21508)
|
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Variovorax sp. CF313 RepID=J3CLM4_9BURK
rbh
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJL74089.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21551..23383)
|
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9L7_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_79, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22980.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23395..23850
|
thioesterase n=1 Tax=Variovorax paradoxus RepID=UPI00036E570D
putative acyl-CoA hydrolase
Acyl-CoA hydrolase {ECO:0000313|EMBL:EJL74087.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_bf_scaffold_192_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23861..25036)
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003807673
rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU35063.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25157..25921)
|
Enoyl-CoA hydratase/isomerase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9L4_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_79, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22982.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
enoyL-CoA hydratase/isomerase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25958..26554)
|
DSBA oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI00036539DE
rbh
Variovorax paradoxus strain MEDvA23 contig_79, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22983.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
dsba oxidoreductase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26581..27330)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9L2_VARPE
rbh
short-chain dehydrogenase/reductase sdr
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU35060.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27333..28169)
|
acyl-CoA thioesterase n=1 Tax=Variovorax paradoxus RepID=UPI00037B6384
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU35059.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_192_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28199..29104)
|
alpha/beta hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI000376255B
rbh
hydrolase
rbh
Putative alpha/beta hydrolase {ECO:0000313|EMBL:EJL74081.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_bf_scaffold_192_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29160..30356)
|
3-ketoacyl-CoA thiolase (EC:2.3.1.16)
rbh
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:AGU47995.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AGU47995.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
3-ketoacyl-CoA thiolase n=1 Tax=Variovorax paradoxus B4 RepID=T1X763_VARPD
rbh
|
|
SCNpilot_expt_500_bf_scaffold_192_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30353..30769)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CLM0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL74079.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|