name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_324_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..128
|
electron transfer flavoprotein subunit beta n=1 Tax=Variovorax paradoxus RepID=UPI00037C56B0
etfA; electron transfer flavoprotein, subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACS19990.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_bf_scaffold_324_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
203..1993
|
Putative acyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XDI7_VARPD
rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16745.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative acyl-CoA dehydrogenase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2073..3035
|
2-nitropropane dioxygenase NPD n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVX7_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16744.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_expt_500_bf_scaffold_324_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3032..4207
|
Putative acyltransferase n=1 Tax=Variovorax sp. CF313 RepID=J2L2Y4_9BURK
rbh
Putative acyltransferase {ECO:0000313|EMBL:EJL79568.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acyltransferase 3
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4363..6051
|
Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD n=1 Tax=Variovorax sp. CF313 RepID=J3CVX8_9BURK
rbh
Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD {ECO:0000313|EMBL:EJL79569.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
cydD; thiol reductant ABC exporter, CydD subunit
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6048..7763
|
Fused ATPase/permease component of ABC-type transporter involved in cytochrome bd biogenesis n=1 Tax=Variovorax sp. CF313 RepID=J2KHC7_9BURK
rbh
Fused ATPase/permease component of ABC-type transporter involved in cytochrome bd biogenesis {ECO:0000313|EMBL:EJL79570.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative thiol reductant ABC exporter, CydC subunit
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7811..9424
|
cydA; cytochrome d ubiquinol oxidase, subunit 1 (EC:1.10.3.-)
rbh
Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Variovorax sp. CF313 RepID=J3CWC8_9BURK
rbh
Cytochrome bd-type quinol oxidase, subunit 1 {ECO:0000313|EMBL:EJL79571.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_bf_scaffold_324_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9421..10575
|
cydB; cytochrome d ubiquinol oxidase, subunit 2 (EC:1.10.3.-)
rbh
Cytochrome d oxidase cyd, subunit II n=1 Tax=Variovorax sp. CF313 RepID=J2TLY3_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16741.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_expt_500_bf_scaffold_324_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10596..10745
|
Putative cyd operon protein YbgT n=1 Tax=Variovorax paradoxus B4 RepID=T1XDZ0_VARPD
ybgT; putative cyd operon protein YbgT
Putative cyd operon protein YbgT {ECO:0000313|EMBL:AGU50544.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_bf_scaffold_324_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10800..11387)
|
Putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CVY1_9BURK
rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EJL79574.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transcriptional regulator, ArsR family
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_11
unknown
|
Not on your lists |
comp(12354..12842)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_324_12
unknown
|
Not on your lists |
comp(12849..13235)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_324_13
unknown
|
Not on your lists |
comp(13440..13649)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_324_14
unknown
|
Not on your lists |
comp(13650..14081)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_324_15
unknown
|
Not on your lists |
comp(14850..15041)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_324_16
unknown
|
Not on your lists |
comp(15753..15914)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_324_17
unknown
|
Not on your lists |
comp(16170..16631)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_324_18
unknown
|
Not on your lists |
comp(17472..17729)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_324_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17911..18357
|
transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003818C65
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:AGU49808.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_bf_scaffold_324_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18385..19419)
|
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVX9_VARPE
rbh
AraC family transcriptional regulator
rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADU36457.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_324_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19560..21119
|
AMP-dependent synthetase and ligase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY0_VARPE
rbh
AMP-dependent synthetase and ligase
rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADU36458.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_324_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21167..22351
|
lipid-transfer protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C88A3
rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16736.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
thiolase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22365..22805
|
acyl dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI000372BE3A
maoc-like dehydratase
MaoC-like dehydratase {ECO:0000313|EMBL:ADU36460.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_324_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22820..23239
|
MaoC family dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI00035D7A39
maoc domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADU36461.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_324_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23274..24104
|
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY4_VARPE
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU36462.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_324_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24167..24955
|
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI000364E008
rbh
enoyL-CoA hydratase/isomerase
rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADU36463.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_bf_scaffold_324_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24942..25793)
|
Putative extracellular solute-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJZ5_VARPD
rbh
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34630.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative extracellular solute-binding protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25825..26511)
|
PKHD-type hydroxylase PMI12_00569 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ybiX; Fe(II)-dependent oxygenase superfamily protein; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
PKHD-type hydroxylase PMI12_00569 n=1 Tax=Variovorax sp. CF313 RepID=J3CWD0_9BURK
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26540..28834)
|
TonB-dependent siderophore receptor n=1 Tax=Variovorax sp. CF313 RepID=J2TLY7_9BURK
rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJL79577.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rubA; rubredoxin RubA; K02014 iron complex outermembrane recepter protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_324_30
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29108..30232
|
ATPase AAA n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H386_PSEAC
rbh
ATPase AAA {ECO:0000313|EMBL:EQM66522.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
|