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SCNpilot_expt_500_bf_scaffold_209

Search features with annotation key words

Displaying items 31-60 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_209_31
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(38709..39224)
DNA (516bp) protein (172aa)
Cytosolic long-chain acyl-CoA thioester hydrolase family protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TQD8_STEMA
Cytosolic long-chain acyl-CoA thioester hydrolase family protein {ECO:0000313|EMBL:EMI51370.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
cytosolic long-chain acyl-CoA thioester hydrolase family protein
SCNpilot_expt_500_bf_scaffold_209_32
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39358..40635)
DNA (1278bp) protein (426aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] rbh
S-adenosylmethionine synthase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQB2_PSEUU rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_500_bf_scaffold_209_33
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40815..42527
DNA (1713bp) protein (571aa)
Putative hemolysin n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJL5_STEMA rbh
Acyltransferase {ECO:0000313|EMBL:KDE91681.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
Putative hemolysin rbh
SCNpilot_expt_500_bf_scaffold_209_34
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42524..43438
DNA (915bp) protein (305aa)
Ser/Thr protein phosphatase family protein,UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L0P2_9GAMM
UDP-2,3-diacylglucosamine hydrolase {ECO:0000313|EMBL:EED40093.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_bf_scaffold_209_35
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43511..44902
DNA (1392bp) protein (464aa)
Outer membrane protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FJH3_STEMA rbh
Outer membrane protein {ECO:0000313|EMBL:EZP46072.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
outer membrane efflux protein rbh
SCNpilot_expt_500_bf_scaffold_209_36
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44899..45909
DNA (1011bp) protein (337aa)
hemolysin secretion protein D n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000363E31F rbh
Hemolysin secretion protein D {ECO:0000313|EMBL:KDE90758.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
secretion protein HlyD family protein; K01993 HlyD family secretion protein rbh
SCNpilot_expt_500_bf_scaffold_209_37
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45894..47072
DNA (1179bp) protein (393aa)
ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030C9808 rbh
ABC transporter permease {ECO:0000313|EMBL:AHY59770.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_209_38
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47069..48187
DNA (1119bp) protein (373aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F045B6 rbh
Membrane protein {ECO:0000313|EMBL:AHY59771.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K09686 antibiotic transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_209_39
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48225..49286
DNA (1062bp) protein (354aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030766D7 rbh
Membrane protein {ECO:0000313|EMBL:AHY60274.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K09151 hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_209_40
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49434..50033
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Halomonas zhanjiangensis RepID=UPI00036F185C
Putative nitroreductase {ECO:0000313|EMBL:EXF46097.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
hypothetical protein; K07078
SCNpilot_expt_500_bf_scaffold_209_41
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50154..51230)
DNA (1077bp) protein (359aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
nifR3 family TIM-barrel protein; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CUX1_STEMA rbh
SCNpilot_expt_500_bf_scaffold_209_42
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51331..52284)
DNA (954bp) protein (318aa)
ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15] rbh
ribokinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FC755E rbh
Ribokinase {ECO:0000313|EMBL:EZP47504.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_expt_500_bf_scaffold_209_43
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52340..53638)
DNA (1299bp) protein (433aa)
Nucleoside transporter n=2 Tax=Stenotrophomonas RepID=B8L0N6_9GAMM rbh
Nucleoside transporter {ECO:0000313|EMBL:EED39257.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Nucleoside permease NupC; K03317 concentrative nucleoside transporter, CNT family rbh
SCNpilot_expt_500_bf_scaffold_209_44
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53839..54810
DNA (972bp) protein (324aa)
NADP-dependent aryl-alcohol dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003743DB1 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AHY60262.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
voltage-gated potassium channel beta subunit rbh
SCNpilot_expt_500_bf_scaffold_209_45
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54952..55149
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Xanthomonas campestris pv. translucens RepID=L7FQ41_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU26400.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_209_46
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55292..57475
DNA (2184bp) protein (728aa)
sugar transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D6BF37 rbh
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor {ECO:0000313|EMBL:EZP47508.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
huvA; outer membrane hemin receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_expt_500_bf_scaffold_209_47
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57549..58487
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CUZ0_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KDE91693.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_209_48
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58537..58890)
DNA (354bp) protein (118aa)
transmembrane signal peptide protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E618D7
Uncharacterized protein {ECO:0000313|EMBL:KER80521.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
transmembrane signal peptide protein; K09922 hypothetical protein
SCNpilot_expt_500_bf_scaffold_209_49
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59029..59742
DNA (714bp) protein (238aa)
Two-component system regulatory protein n=3 Tax=Xanthomonas campestris pv. translucens RepID=K8Z8G9_XANCT rbh
Response regulator mprA {ECO:0000313|EMBL:CCP42367.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
two-component system regulatory protein rbh
SCNpilot_expt_500_bf_scaffold_209_50
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59845..61164
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
psensor histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000317E329 rbh
putative two-component system sensor histidine kinase transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_209_51
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61394..61774
DNA (381bp) protein (127aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107]
DeoR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FDD122
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:AHY60251.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_expt_500_bf_scaffold_209_52
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61826..62575
DNA (750bp) protein (250aa)
Integral membrane protein TerC n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SK29_STRM5 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EED37860.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
integral membrane protein TerC rbh
SCNpilot_expt_500_bf_scaffold_209_53
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62709..63344
DNA (636bp) protein (212aa)
LemA family protein n=1 Tax=Xanthomonas oryzae RepID=UPI0002F1C991 rbh
LemA family protein {ECO:0000313|EMBL:KGK56909.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
LemA family protein; K03744 LemA protein rbh
SCNpilot_expt_500_bf_scaffold_209_54
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63349..64218
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V703_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78306.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein; K06872 uncharacterized protein rbh
SCNpilot_expt_500_bf_scaffold_209_55
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64218..64709
DNA (492bp) protein (164aa)
membrane protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036842AE
Membrane protein {ECO:0000313|EMBL:AJC45848.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_209_56
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64774..65679
DNA (906bp) protein (302aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] rbh
prolipoprotein diacylglyceryl transferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000309A44F rbh
SCNpilot_expt_500_bf_scaffold_209_57
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65754..66548
DNA (795bp) protein (265aa)
thyA; Thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] rbh
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Thymidylate synthase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJP0_STEMA rbh
SCNpilot_expt_500_bf_scaffold_209_58
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66548..67045
DNA (498bp) protein (166aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CJ69_STEMA
SCNpilot_expt_500_bf_scaffold_209_59
unknown

Not on your lists

67184..67561
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_209_60
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67565..68602)
DNA (1038bp) protein (346aa)
apaH; diadenosine tetraphosphatase; K01525 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] rbh
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088330};; Ap4A hydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine tetraphosphatase {ECO:0000256|HAMAP-Rule:MF_00199}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xan
Bis(5'nucleosyl)-tetraphosphatase, ApaH n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SK39_STRM5 rbh
Displaying items 31-60 of 82 in total

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