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SCNpilot_expt_500_bf_scaffold_211

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_211_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162..530)
DNA (369bp) protein (123aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EE0FAC
Transcriptional regulator {ECO:0000313|EMBL:EQM75136.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
response regulator receiver
SCNpilot_expt_500_bf_scaffold_211_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(872..3229)
DNA (2358bp) protein (786aa)
Tex-like protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K4V4_STEMA rbh
Tex-like protein; K06959 uncharacterized protein rbh
Tex-like protein {ECO:0000313|EMBL:AEM51790.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_expt_500_bf_scaffold_211_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3364..3579)
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas RepID=G0K4V5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP45417.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_211_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3710..4195)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E6ED62
Uncharacterized protein {ECO:0000313|EMBL:AHY58713.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_211_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4204..4572)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036686B5
Uncharacterized protein {ECO:0000313|EMBL:AHY58711.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_211_6
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4569..5633)
DNA (1065bp) protein (355aa)
poly (3-hydroxybutyric acid) synthase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Poly (3-hydroxybutyric acid) synthase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HC87_XANCT rbh
Poly (3-hydroxybutyric acid) synthase {ECO:0000313|EMBL:ELQ15680.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
SCNpilot_expt_500_bf_scaffold_211_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5630..6691)
DNA (1062bp) protein (354aa)
pha synthase subunit protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B4EC rbh
PHA synthase subunit {ECO:0000313|EMBL:AHY58709.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
poly(hydroxyalcanoate) granule associated protein rbh
SCNpilot_expt_500_bf_scaffold_211_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6753..7367)
DNA (615bp) protein (205aa)
pssA2; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6BFA4 rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AHY58708.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_expt_500_bf_scaffold_211_9
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7532..8179
DNA (648bp) protein (216aa)
methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000380F415
Methyltransferase type 11 {ECO:0000313|EMBL:EED37912.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
type 11 methyltransferase
SCNpilot_expt_500_bf_scaffold_211_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8183..8671)
DNA (489bp) protein (163aa)
7,8-dihydro-8-oxoguanine-triphosphatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000378C570
7,8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:AHY58706.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Nudix hydrolase family protein
SCNpilot_expt_500_bf_scaffold_211_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8784..9281)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D734E5
Uncharacterized protein {ECO:0000313|EMBL:AHY58705.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K09920 hypothetical protein
SCNpilot_expt_500_bf_scaffold_211_12
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9313..10134)
DNA (822bp) protein (274aa)
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00160002};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00159999};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=1261556 species="Bacteri
PEP synthetase regulatory protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031D0C93 rbh
hypothetical protein; K09773 hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_211_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10329..12665
DNA (2337bp) protein (779aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
pps; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] rbh
Phosphoenolpyruvate synthase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KHW9_STEMA rbh
SCNpilot_expt_500_bf_scaffold_211_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12851..13675)
DNA (825bp) protein (275aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037F3DF7 rbh
Membrane protein {ECO:0000313|EMBL:AHY58513.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
17 kDa surface antigen rbh
SCNpilot_expt_500_bf_scaffold_211_15
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13831..14061
DNA (231bp) protein (77aa)
Putative transmembrane protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTU0_PSEUU
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ADV27589.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_expt_500_bf_scaffold_211_16
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14065..14835
DNA (771bp) protein (257aa)
hypothetical protein; K03424 TatD DNase family protein [EC:3.1.21.-] rbh
DNAase n=1 Tax=Xanthomonas arboricola RepID=UPI0002D777C4 rbh
DNAase {ECO:0000313|EMBL:AKC77715.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
SCNpilot_expt_500_bf_scaffold_211_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14878..15672)
DNA (795bp) protein (265aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029B1F8A rbh
molybdopterin biosynthesis protein rbh
Putative ThiF domain protein {ECO:0000313|EMBL:CAQ46654.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_expt_500_bf_scaffold_211_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15744..16175
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G7Z4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP12362.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_211_19
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16285..16776
DNA (492bp) protein (164aa)
Peptidoglycan-associated outer membrane lipoprotein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4P4_9GAMM
Peptidoglycan-associated outer membrane lipoprotein {ECO:0000313|EMBL:EED37195.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
17 kDa surface antigen; K06077 outer membrane lipoprotein SlyB
SCNpilot_expt_500_bf_scaffold_211_20
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16859..17068)
DNA (210bp) protein (70aa)
Major cold shock protein CspA n=4 Tax=Stenotrophomonas maltophilia RepID=J7VBR4_STEMA
putative cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_500_bf_scaffold_211_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17301..17786
DNA (486bp) protein (162aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036EF327
Membrane protein {ECO:0000313|EMBL:AHY58507.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K09793 hypothetical protein
SCNpilot_expt_500_bf_scaffold_211_22
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17805..19043
DNA (1239bp) protein (413aa)
pldA; outer membrane phospholipase A (EC:3.1.1.32); K01058 phospholipase A1 [EC:3.1.1.32] rbh
phospholipase n=1 Tax=Xanthomonas sacchari RepID=UPI0002630196 rbh
Phospholipase {ECO:0000313|EMBL:AJC45017.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_expt_500_bf_scaffold_211_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19049..19396
DNA (348bp) protein (116aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
arsC2; Arsenate reductase (EC:1.20.4.1)
Arsenate reductase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D7U0_STEMA
SCNpilot_expt_500_bf_scaffold_211_24
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19564..20673
DNA (1110bp) protein (370aa)
sterol desaturase (EC:1.14.21.6); K00227 lathosterol oxidase [EC:1.14.21.6] rbh
Lathosterol oxidase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZEE1_9XANT rbh
Lathosterol oxidase {ECO:0000313|EMBL:ETC88727.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
SCNpilot_expt_500_bf_scaffold_211_25
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20741..21376)
DNA (636bp) protein (212aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
glutathione S-transferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031269C0 rbh
Glutathione S-transferase domain {ECO:0000313|EMBL:ADV27598.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_expt_500_bf_scaffold_211_26
unknown

Not on your lists

comp(21493..21813)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_211_27
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21891..23408)
DNA (1518bp) protein (506aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2] rbh
fumarate hydratase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FDC6B5 rbh
Fumarate hydratase {ECO:0000313|EMBL:AHY58501.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_expt_500_bf_scaffold_211_28
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23901..24545
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D635_9BURK
Membrane protein {ECO:0000313|EMBL:KGO99382.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_211_29
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24608..24925
DNA (318bp) protein (106aa)
Transporter {ECO:0000313|EMBL:KGO99385.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
SCNpilot_expt_500_bf_scaffold_211_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24976..26847
DNA (1872bp) protein (624aa)
ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F2155D rbh
Stenotrophomonas maltophilia strain ZBG7B contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86621.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial rbh
Displaying items 1-30 of 80 in total

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