name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_153_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..296)
|
Putative cointegrase resolution protein n=2 Tax=Rhodanobacter RepID=I4WWN1_9GAMM
Putative cointegrase resolution protein {ECO:0000313|EMBL:EIL90322.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Plasmid replication region DNA-binding N-term
|
|
SCNpilot_expt_500_bf_scaffold_153_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
465..1628
|
Phage integrase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN0_9GAMM
rbh
site-specific recombinase XerD
rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:AGG88839.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1625..1933
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2050..3624)
|
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEH5_9GAMM
rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG89169.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3718..4119)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN4_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89167.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4211..5392)
|
Major facilitator transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN5_9GAMM
rbh
Major Facilitator Superfamily transporter
rbh
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AGG89166.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5477..6727)
|
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NED1_9GAMM
rbh
signal transduction histidine kinase
rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:AGG89165.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6711..7391)
|
DNA-binding response regulator ColR n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN7_9GAMM
rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG89164.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7397..10531)
|
Multidrug ABC transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN8_9GAMM
rbh
heavy metal efflux pump, cobalt-zinc-cadmium
rbh
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10528..11580)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN9_9GAMM
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11577..13040)
|
Outer membrane efflux protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWP0_9GAMM
rbh
outer membrane protein
rbh
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13092..14810)
|
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEC7_9GAMM
rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG89160.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14807..15832)
|
Glycosyl transferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWP2_9GAMM
rbh
glycosyl transferase
rbh
Glycosyl transferase {ECO:0000313|EMBL:AGG89159.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16026..16583)
|
Co/Zn/Cd efflux system component n=1 Tax=Rhodanobacter denitrificans RepID=I4WWR8_9GAMM
Co/Zn/Cd efflux system component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_153_15
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16904..19897
|
Transposase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWJ9_9GAMM
rbh
Transposase for transposon Tn4556 {ECO:0000313|EMBL:GAC32312.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola polaris LMG 21857.;"
transposase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_153_16
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19989..21098)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344ECB1
rbh
Type II restriction enzyme {ECO:0000313|EMBL:KGM53140.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_153_17
unknown
|
Not on your lists |
comp(21079..21711)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_153_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21715..23508
|
copper oxidase n=1 Tax=Dyella ginsengisoli RepID=UPI000348EE6E
rbh
Copper-resistance protein, CopA family protein {ECO:0000313|EMBL:EIL89957.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copper-resistance protein, CopA family
|
|
SCNpilot_expt_500_bf_scaffold_153_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23505..24941
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CCD5B
rbh
uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24955..26043
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B9FBF
rbh
Cytochrome c family protein {ECO:0000313|EMBL:EIL98576.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ketosteroid isomerase-like enzyme
|
|
SCNpilot_expt_500_bf_scaffold_153_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26040..26495
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003451B6A
rbh
putative metal-binding protein
Putative metal-binding protein {ECO:0000313|EMBL:AGG88845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_22
unknown
|
Not on your lists |
26756..27196
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003472C55
rbh
|
|
SCNpilot_expt_500_bf_scaffold_153_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27272..28555
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00038293FB
rbh
Putative outer membrane efflux protein {ECO:0000313|EMBL:EIM01183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane protein
|
|
SCNpilot_expt_500_bf_scaffold_153_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28552..30054
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DF473
rbh
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family {ECO:0000313|EMBL:EIL94374.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
RND family efflux transporter, MFP subunit
|
|
SCNpilot_expt_500_bf_scaffold_153_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30051..32219
|
cation transporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034C0FD6
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIM00604.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
heavy metal efflux pump, cobalt-zinc-cadmium
|
|
SCNpilot_expt_500_bf_scaffold_153_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32174..33187
|
cation transporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034C0FD6
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG88851.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33184..33534
|
Copper binding periplasmic protein CusF n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88852.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33665..34006
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01187.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
SCNpilot_expt_500_bf_scaffold_153_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34141..34389)
|
Hg(Ii)-responsive transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ6_9GAMM
Hg(Ii)-responsive transcriptional regulator {ECO:0000313|EMBL:EIM01188.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
merR; Mercuric resistance operon regulatory protein
|
|
SCNpilot_expt_500_bf_scaffold_153_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34574..34996
|
Putative mercury transport protein MerC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ7_9GAMM
Putative mercury transport protein MerC {ECO:0000313|EMBL:EIM01189.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
merC; putative mercury transport protein MerC
|