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SCNpilot_expt_500_bf_scaffold_207

Search features with annotation key words

Displaying items 31-60 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_207_31
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24275..24937
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V5G8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77791.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_207_32
unknown

Not on your lists

24927..25370
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003797B4E
SCNpilot_expt_500_bf_scaffold_207_33
unknown

Not on your lists

25646..25816
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_34

Not on your lists

25806..26801
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B33A1 rbh
DNA processing protein {ECO:0000313|EMBL:AFR44094.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_207_35
unknown

Not on your lists

26798..27169
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003697076
SCNpilot_expt_500_bf_scaffold_207_36
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

27166..27594
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000378A2C6
ankyrin repeat-containing protein
Ankyrin repeat protein {ECO:0000313|EMBL:ABD00779.1}; TaxID=321327 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium; Yellowstone A-Prime).;"
SCNpilot_expt_500_bf_scaffold_207_37
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27594..29588
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C667E rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP77792.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
traD; putative type IV secretory protein conjugation protein TraD
SCNpilot_expt_500_bf_scaffold_207_38
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29627..30214
DNA (588bp) protein (196aa)
Putative restriction endonuclease protein n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M905_9XANT
Restriction endonuclease {ECO:0000313|EMBL:KGK67679.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_207_39
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30208..33084
DNA (2877bp) protein (959aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346991E rbh
Putative trwC protein {ECO:0000313|EMBL:EED37881.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
traA; putative conjugal transfer protein TraA
SCNpilot_expt_500_bf_scaffold_207_40
unknown

Not on your lists

comp(33081..33551)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347D08E
SCNpilot_expt_500_bf_scaffold_207_41
unknown

Not on your lists

comp(33646..34107)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_42
unknown

Not on your lists

comp(34226..34516)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037ACA3F
SCNpilot_expt_500_bf_scaffold_207_43
unknown

Not on your lists

comp(34518..35096)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C054D rbh
SCNpilot_expt_500_bf_scaffold_207_44
unknown

Not on your lists

comp(35112..35564)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348B851
SCNpilot_expt_500_bf_scaffold_207_45
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35576..38029)
DNA (2454bp) protein (818aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003821EA1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR68091.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
outer membrane protein
SCNpilot_expt_500_bf_scaffold_207_46
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38180..39010
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000381B7DF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR00297.1}; TaxID=374931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae (strain PittGG).;"
SCNpilot_expt_500_bf_scaffold_207_47
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39232..39399
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034976F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM26544.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_500_bf_scaffold_207_48
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39611..41548
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Yersinia enterocolitica RepID=Q70W82_YEREN rbh
DNA methyltransferase {ECO:0000313|EMBL:KJX29689.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
DNA methylase N-4/N-6 domain protein rbh
SCNpilot_expt_500_bf_scaffold_207_49
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41538..43922
DNA (2385bp) protein (795aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IFK5_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:KGY49595.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_207_50
unknown

Not on your lists

comp(44574..45311)
DNA (738bp) protein (246aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_51
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45750..47336)
DNA (1587bp) protein (529aa)
PAS sensor protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W7H9_METEP
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:ABY31748.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
SCNpilot_expt_500_bf_scaffold_207_52
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47551..47829)
DNA (279bp) protein (93aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKA4_9GAMM
Fe-S cluster protector protein
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_207_53
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47826..48887)
DNA (1062bp) protein (354aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-) rbh
A/G-specific adenine glycosylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW6_9GAMM rbh
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EIM02208.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_207_54
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48884..49975)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW7_9GAMM
uncharacterized protein involved in outer membrane biogenesis
Uncharacterized protein involved in outer membrane biogenesis {ECO:0000313|EMBL:AGG90106.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_207_55
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49999..51111)
DNA (1113bp) protein (371aa)
cell division protein FtsY n=1 Tax=Dyella ginsengisoli RepID=UPI00034D11B6 rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal recognition particle-docking protein FtsY
SCNpilot_expt_500_bf_scaffold_207_56
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51177..51761
DNA (585bp) protein (195aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR2_9GAMM rbh
16S rRNA m(2)G-966 methyltransferase rbh
SCNpilot_expt_500_bf_scaffold_207_57
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51847..52401
DNA (555bp) protein (185aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR1_9GAMM
SCNpilot_expt_500_bf_scaffold_207_58
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52394..52897
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYG0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92251.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_207_59
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52959..53219
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ9_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_207_60
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53216..54934
DNA (1719bp) protein (573aa)
gamma-glutamyltransferase 1 (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1M8_9GAMM rbh
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:EIL93369.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Displaying items 31-60 of 82 in total

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