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SCNpilot_expt_500_bf_scaffold_207

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_207_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..729
DNA (729bp) protein (243aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYU3_9GAMM
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_207_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(961..1365)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034812DE
Uncharacterized protein {ECO:0000313|EMBL:AHX15894.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
globin
SCNpilot_expt_500_bf_scaffold_207_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1618..2001
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W836_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95627.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_207_4
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2020..2346)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE78_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV36708.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_207_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2372..3718)
DNA (1347bp) protein (449aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE79_9GAMM
SCNpilot_expt_500_bf_scaffold_207_6
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3747..4760)
DNA (1014bp) protein (338aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
arginase (EC:3.5.3.1) rbh
arginase n=1 Tax=Dyella japonica RepID=UPI0002ED7915 rbh
SCNpilot_expt_500_bf_scaffold_207_7
unknown

Not on your lists

5271..6878
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003476732 rbh
SCNpilot_expt_500_bf_scaffold_207_8
unknown

Not on your lists

6923..7807
DNA (885bp) protein (295aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_9

Not on your lists

7909..8616
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FXY1_RHIML
Marine sediment metagenome DNA, contig: S01H1_S25173 {ECO:0000313|EMBL:GAG24792.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_500_bf_scaffold_207_10
unknown

Not on your lists

comp(8676..9365)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037CB368 rbh
SCNpilot_expt_500_bf_scaffold_207_11
unknown

Not on your lists

10437..11063
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003626DA5 rbh
SCNpilot_expt_500_bf_scaffold_207_12
unknown

Not on your lists

11060..11326
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00035D95A3
SCNpilot_expt_500_bf_scaffold_207_13
unknown

Not on your lists

11465..11761
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_14
unknown

Not on your lists

11795..11995
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_15
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12726..13145
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00035FEA6D
Uncharacterized protein {ECO:0000313|EMBL:KIF00481.1}; TaxID=1571774 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
SCNpilot_expt_500_bf_scaffold_207_16
unknown

Not on your lists

13147..13479
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037C4D75
SCNpilot_expt_500_bf_scaffold_207_17
unknown

Not on your lists

13601..14119
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036B60D1 rbh
SCNpilot_expt_500_bf_scaffold_207_18
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14121..14741
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000360549D rbh
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
Chromosome partitioning protein {ECO:0000313|EMBL:AGT09381.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_500_bf_scaffold_207_19
unknown

Not on your lists

14738..15343
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003456767 rbh
SCNpilot_expt_500_bf_scaffold_207_20
unknown

Not on your lists

comp(15327..16151)
DNA (825bp) protein (275aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_21
unknown

Not on your lists

17171..17500
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003487D40
SCNpilot_expt_500_bf_scaffold_207_22
unknown

Not on your lists

17516..17857
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003675690
SCNpilot_expt_500_bf_scaffold_207_23
unknown

Not on your lists

17924..18274
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_24
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18318..19007
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003468F38 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT51277.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
SCNpilot_expt_500_bf_scaffold_207_25
unknown

Not on your lists

19011..19754
DNA (744bp) protein (248aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_26
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19831..20178
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DEECA
Uncharacterized protein {ECO:0000313|EMBL:CCI08443.1}; TaxID=213618 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 7941.;"
SCNpilot_expt_500_bf_scaffold_207_27
unknown

Not on your lists

20256..20600
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_207_28
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20602..23058
DNA (2457bp) protein (819aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DEECA rbh
Uncharacterized protein {ECO:0000313|EMBL:CCI08443.1}; TaxID=213618 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 7941.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_207_29
unknown

Not on your lists

23055..23384
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CDCF2
SCNpilot_expt_500_bf_scaffold_207_30
unknown

Not on your lists

comp(23446..24114)
DNA (669bp) protein (223aa)

This feature has no annotations

Displaying items 1-30 of 82 in total

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