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SCNpilot_expt_500_bf_scaffold_297

Search features with annotation key words

Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_297_1
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..638)
DNA (636bp) protein (212aa)
Cation-transporting ATPase PacS {ECO:0000313|EMBL:EWS56606.1}; EC=3.6.3.- {ECO:0000313|EMBL:EWS56606.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Heavy metal translocating P-type ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK06_9BURK
copA; copper-transporting ATPase CopA
SCNpilot_expt_500_bf_scaffold_297_2
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(635..1960)
DNA (1326bp) protein (442aa)
NreB protein n=3 Tax=Rhizobium meliloti RepID=K0PKI5_RHIML rbh
NreB protein; K07785 MFS transporter, NRE family, putaive nickel resistance protein rbh
Permease, MFS {ECO:0000313|EMBL:AAK65554.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_expt_500_bf_scaffold_297_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2020..2304)
DNA (285bp) protein (95aa)
UPI0003CDE33C related cluster n=1 Tax=unknown RepID=UPI0003CDE33C
Nickel-resistant pritein NirB {ECO:0000313|EMBL:ESW75462.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
nickel-resistant pritein NirB
SCNpilot_expt_500_bf_scaffold_297_4
unknown

Not on your lists

2392..2790
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_297_5
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2852..3589
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5AEG6_9PROT rbh
Putative ORF1 [Plasmid pTOM9] {ECO:0000313|EMBL:CDS53349.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_297_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3945..4256
DNA (312bp) protein (104aa)
Transposase of IS3 family n=1 Tax=uncultured bacterium RepID=J9RX82_9BACT
transposase is3/is911 family protein; K07483 transposase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_expt_500_bf_scaffold_297_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4289..5146
DNA (858bp) protein (286aa)
Integrase catalytic region protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU73_ALIDB rbh
integrase catalytic region protein rbh
Integrase catalytic region protein {ECO:0000313|EMBL:ADV00478.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_297_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5124..5555
DNA (432bp) protein (144aa)
Transmembrane anchor protein n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GC47_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EIK92751.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_297_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5815..6093)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU77_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00482.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_297_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6218..7126
DNA (909bp) protein (303aa)
LysR substrate-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU78_ALIDB rbh
LysR family transcriptional regulator rbh
LysR substrate-binding protein {ECO:0000313|EMBL:ADV00483.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_297_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7551..8222
DNA (672bp) protein (224aa)
Integrase (Int) n=2 Tax=Pseudomonas RepID=H7EU11_PSEST
Phage-related integrase {ECO:0000313|EMBL:GAO23778.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
phage-related integrase
SCNpilot_expt_500_bf_scaffold_297_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8678..9079
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000363A5CF
Uncharacterized protein {ECO:0000313|EMBL:CDM25568.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
integrase catalytic subunit
SCNpilot_expt_500_bf_scaffold_297_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10280..10990
DNA (711bp) protein (237aa)
Putative uncharacterized protein id=1351593 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=CG_Rhodocyc_01
SCNpilot_expt_500_bf_scaffold_297_14
unknown

Not on your lists

10987..11130
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_297_15
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11141..12451
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVU8_POLNA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM39776.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_expt_500_bf_scaffold_297_16
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13433..13909
DNA (477bp) protein (159aa)
Putative metal-binding protein n=1 Tax=Polaromonas sp. CF318 RepID=J2UIR3_9BURK
Putative metal-binding protein {ECO:0000313|EMBL:EJL91337.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_297_17
unknown

Not on your lists

14030..14182
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_297_18
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14145..16454)
DNA (2310bp) protein (770aa)
Poly(3-hydroxyalkanoate) synthetase protein {ECO:0000313|EMBL:CDG81342.1}; EC=2.3.1.- {ECO:0000313|EMBL:CDG81342.1};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
hypothetical protein, partial n=1 Tax=Cupriavidus sp. WS RepID=UPI00037C9884 rbh
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_297_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16525..16770)
DNA (246bp) protein (82aa)
copper-transporting ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-transporting ATPase {ECO:0000313|EMBL:BAH38368.1}; EC=3.6.3.4 {ECO:0000313|EMBL:BAH38368.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Copper-transporting ATPase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A808_GEMAT
SCNpilot_expt_500_bf_scaffold_297_20
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16937..18124)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
acetyl-CoA acetyltransferase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C682 rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EXS68733.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
SCNpilot_expt_500_bf_scaffold_297_21
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18402..18671
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPZ8_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS70094.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_500_bf_scaffold_297_22
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18692..19351
DNA (660bp) protein (220aa)
Protein-S-isoprenylcysteine methyltransferase n=5 Tax=Ralstonia RepID=C6BR38_RALP1 rbh
protein-S-isoprenylcysteine methyltransferase rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ75359.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
SCNpilot_expt_500_bf_scaffold_297_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19368..21884
DNA (2517bp) protein (839aa)
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W625_ACISJ
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase {ECO:0000313|EMBL:ABM41700.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_500_bf_scaffold_297_24
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21969..22523
DNA (555bp) protein (185aa)
ubiquinol-cytochrome C reductase, iron-sulfur subunit (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3G5_NITHN
Tax=CG_Rhodocyc_01
SCNpilot_expt_500_bf_scaffold_297_25
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22531..23892
DNA (1362bp) protein (454aa)
Beta-lactamase domain protein n=6 Tax=Ralstonia RepID=B2UE72_RALPJ rbh
beta-lactamase domain protein; K07576 metallo-beta-lactamase family protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_expt_500_bf_scaffold_297_26
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23889..25430
DNA (1542bp) protein (514aa)
thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] rbh
Putative thymidine phosphorylase n=6 Tax=Ralstonia RepID=B2UE73_RALPJ rbh
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_expt_500_bf_scaffold_297_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25427..26338
DNA (912bp) protein (304aa)
Putative ribose-phosphate pyrophosphokinase n=1 Tax=Variovorax paradoxus B4 RepID=T1XLP5_VARPD rbh
putative ribose-phosphate pyrophosphokinase rbh
Putative ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:AGU53045.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_500_bf_scaffold_297_28
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26335..26595
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLP0_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM36568.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_expt_500_bf_scaffold_297_29
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26623..28260
DNA (1638bp) protein (546aa)
ABC-1 domain protein n=6 Tax=Ralstonia RepID=B2UE57_RALPJ rbh
ABC-1 domain-containing protein; K03688 ubiquinone biosynthesis protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_expt_500_bf_scaffold_297_30
unknown

Not on your lists

comp(28289..28624)
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying items 1-30 of 164 in total

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