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SCNpilot_expt_500_bf_scaffold_2059_2

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(437..1744)

Top 3 Functional Annotations

Value Algorithm Source
Fis family two component sigma-54 specific transcriptional regulator id=5081118 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 436.0
  • Bit_score: 773
  • Evalue 1.40e-220
  • rbh
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 437.0
  • Bit_score: 624
  • Evalue 3.20e-176
  • rbh
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 436.0
  • Bit_score: 773
  • Evalue 1.90e-220

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGACATCCATCCTGTTGATCGAAGACGACCCCATCATGGGTGAATCGCTGCTGCAGCGTTTCGAACTGGAGGGCTTGCAGGTGAGCTGGTGCCGGCGGATCAGCGAGGCGCGCGACGCATTCGCCGTCCTGCCGTCGGCCGTGGTCAGCGATGTCCGGCTGCCCGACGGTCTGGCCACCGAATGGTTCGTGGGTTTGCCCGCAACCGTCAGGGCCTTACCATGGTTCTTTCTCACGGGTTATGGCAGCGTCAACGATGCGGTCGCGGCGGTCCGTGCCGGCGCCCGGGAGTACCTGACCAAGCCTTTCGATATCGAAAGGCTCGTGGCCAAGATCAGGGAAGCGGTAGACCTGTCCGTCGCGCCCGACGATGACGCGCTGCTCGGCGTGTCGGCCGCCATGCGCCGAGTGGAGGGCATGGTGCGCAAGGTGGCCAGCCAGCGCGTGTCGGTGCTGCTGACGGGTGAATCCGGCGTCGGCAAGGAGGTAGCGGCCCAGCTCATTCACAGCCTGGACCCCCGAGCGAGCAAGGGCGACTTCGTTGCAGTGAACTGCGCCGCAATCCCTGAAACCATGATGGAGGCGGAGTTCTTGGGCTACGAAAAGGGCGCGTTCTCGGGGGCCGTGCGTACCCACAAAGGCTACTTGGAACGTGCCCACAAAGGTACGTTGTTCCTGGACGAGGTGGGTGAACTGCCCGCAAACATGCAGGCCAAGCTATTGCGCGCCCTACAGGAAAAGTGCTTCTTTCGCCTGGGAGCTGAGCGCACCACGCAGAGCGAATTTCGCATCCTGGCCGCCACCAACCGCGACCTGTATGCGGACATGAACGCAGGCTCGTTCCGCGAAGACCTGTTCTACCGGCTAGCGGTCATCAAGATCGAGTTGCCACCGTTGCGCGAGCGACCGGAGGACATCCGGTGGCTGACCGAGAAGCTGCTCGCCCAGATCGTAGTGGAGCAAGGGCGTCCCCTGGCCATGTCCGAACCTTTTGTACGCGACCTGATGGGCCGCGAATGGCGGGGCAACGTGCGGGAGTTGCGTTCGTTCCTAGAGGAGGCCGTGGTGTTCAGTGACGGTGGTGTGCTGGACCTTCCCGAAAGTCAGACCTCCATCTCTTTCACGGCAGCTGATGCTTCCGCAGATGGGATCGTGACCCTGCAGCGCGTGGTCGAAACCGTGGAGCGGTCTCACATCCAGAAGGCGCTGCAGCATTGCGATGGCAGCGTCGGCAAGACCGCCGAGGTACTGGGTATCAGCCGCAAGACCTTGTGGGAGAAAATGAAAAGACTCGCCATCTCCGCATGA
PROTEIN sequence
Length: 436
MTSILLIEDDPIMGESLLQRFELEGLQVSWCRRISEARDAFAVLPSAVVSDVRLPDGLATEWFVGLPATVRALPWFFLTGYGSVNDAVAAVRAGAREYLTKPFDIERLVAKIREAVDLSVAPDDDALLGVSAAMRRVEGMVRKVASQRVSVLLTGESGVGKEVAAQLIHSLDPRASKGDFVAVNCAAIPETMMEAEFLGYEKGAFSGAVRTHKGYLERAHKGTLFLDEVGELPANMQAKLLRALQEKCFFRLGAERTTQSEFRILAATNRDLYADMNAGSFREDLFYRLAVIKIELPPLRERPEDIRWLTEKLLAQIVVEQGRPLAMSEPFVRDLMGREWRGNVRELRSFLEEAVVFSDGGVLDLPESQTSISFTAADASADGIVTLQRVVETVERSHIQKALQHCDGSVGKTAEVLGISRKTLWEKMKRLAISA*