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SCNpilot_expt_500_bf_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 214 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_67_1
unknown

Not on your lists

2..265
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_67_2
unknown

Not on your lists

comp(236..394)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_67_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

862..1107
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8I9_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74932.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_bf_scaffold_67_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1078..2286)
DNA (1209bp) protein (403aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
talA; bifunctional transaldolase/phosoglucose isomerase (EC:2.2.1.2)
Transaldolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHV3_9PROT
SCNpilot_expt_500_bf_scaffold_67_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2459..3304
DNA (846bp) protein (282aa)
N-acyl homoserine lactone hydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE2_9PROT rbh
Beta-lactamase {ECO:0000313|EMBL:KIO48479.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
putative AHL-lactonase rbh
SCNpilot_expt_500_bf_scaffold_67_6
unknown

Not on your lists

comp(3487..3585)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_67_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3796..4434
DNA (639bp) protein (213aa)
Transcriptional regulator n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J2_NITMU rbh
putative transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:ABB74929.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_bf_scaffold_67_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4547..5248)
DNA (702bp) protein (234aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31] rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:ABB74928.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ABB74928.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
6-phosphogluconolactonase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J3_NITMU rbh
SCNpilot_expt_500_bf_scaffold_67_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5750..6154)
DNA (405bp) protein (135aa)
DoxX family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHV7_9PROT
GntR family transcriptional regulator {ECO:0000313|EMBL:KIO48476.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
DoxX; K15977 putative oxidoreductase
SCNpilot_expt_500_bf_scaffold_67_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6456..6884)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG35_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48329.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_67_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7114..8019)
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase-like protein; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] rbh
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF0_9PROT rbh
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KIO48470.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_500_bf_scaffold_67_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8114..9232)
DNA (1119bp) protein (373aa)
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] rbh
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Transaldolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J8_NITMU rbh
SCNpilot_expt_500_bf_scaffold_67_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9762..9962
DNA (201bp) protein (67aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y595_NITMU
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABB76076.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_bf_scaffold_67_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10117..10908)
DNA (792bp) protein (264aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] rbh
Hydroxyacylglutathione hydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK8_9PROT rbh
SCNpilot_expt_500_bf_scaffold_67_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11049..11831
DNA (783bp) protein (261aa)
FIG005121: SAM-dependent methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL3_9PROT rbh
FIG005121: SAM-dependent methyltransferase {ECO:0000313|EMBL:CCU61987.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
generic methyl-transferase rbh
SCNpilot_expt_500_bf_scaffold_67_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11828..12340
DNA (513bp) protein (171aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHW6_9PROT
SCNpilot_expt_500_bf_scaffold_67_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12402..13133
DNA (732bp) protein (244aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
DNA polymerase III epsilon subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF5_9PROT rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIO48466.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_500_bf_scaffold_67_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13162..14529
DNA (1368bp) protein (456aa)
Heavy metal RND efflux outer membrane protein,CzcC family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFL2_9PROT rbh
Heavy metal RND efflux outer membrane protein,CzcC family {ECO:0000313|EMBL:CCU61991.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC rbh
SCNpilot_expt_500_bf_scaffold_67_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14584..15765
DNA (1182bp) protein (394aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL8_9PROT rbh
Probable Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:CCU61992.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
SCNpilot_expt_500_bf_scaffold_67_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15762..18827
DNA (3066bp) protein (1022aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHX0_9PROT rbh
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:CCU61993.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
heavy metal efflux pump CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
SCNpilot_expt_500_bf_scaffold_67_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18837..19163
DNA (327bp) protein (109aa)
Nitrogen regulatory protein P-II n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF8_9PROT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CCU61994.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
nitrogen regulatory protein P-II (GlnB, GlnK); K04751 nitrogen regulatory protein P-II 1
SCNpilot_expt_500_bf_scaffold_67_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19335..20717)
DNA (1383bp) protein (461aa)
Radical SAM n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8K3_NITMU rbh
Radical SAM protein {ECO:0000313|EMBL:KIO48465.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
radical SAM family protein rbh
SCNpilot_expt_500_bf_scaffold_67_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20887..21378
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHN6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48464.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_67_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21558..21992)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8K4_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74917.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_bf_scaffold_67_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22078..22989)
DNA (912bp) protein (304aa)
Cytochrome c family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKQ3_9PROT rbh
Cytochrome c family protein {ECO:0000313|EMBL:CCU64046.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
cytochrome c, class I rbh
SCNpilot_expt_500_bf_scaffold_67_26
unknown

Not on your lists

23748..24179
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_67_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24413..25765
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6U2_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO50486.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_67_28
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25900..26490
DNA (591bp) protein (197aa)
SCO1/SenC n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WZ1_NITEU
SCO1; SCO1/SenC; K07152
SCO1/SenC {ECO:0000313|EMBL:CAD84420.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCNpilot_expt_500_bf_scaffold_67_29
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26487..27158
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6U5_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75526.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_bf_scaffold_67_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27311..28663
DNA (1353bp) protein (451aa)
Short chain amide porin n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6U3_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO50553.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
Displaying items 1-30 of 214 in total

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