name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_264_1
unknown
|
Not on your lists |
comp(3..71)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_264_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
125..664
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHR9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48754.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_264_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(679..1998)
|
Permease of the major facilitator superfamily n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHG1_9PROT
rbh
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CCU61927.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
major facilitator transporter; K06902 MFS transporter, UMF1 family
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_4
unknown
|
Not on your lists |
2616..2810
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_264_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3151..3645)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIB4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49855.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_264_6
Trichoderma atroviride, Trichoderma, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi
|
Not on your lists |
3841..4524
|
Putative uncharacterized protein n=1 Tax=Hypocrea atroviridis (strain ATCC 20476 / IMI 206040) RepID=G9NP38_HYPAI
rbh
Uncharacterized protein {ECO:0000313|EMBL:EHK47824.1}; TaxID=452589 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma.;" source="Hypocrea atroviridis (strain ATCC 20476 / IMI 206040) (Trichoderma; atroviride).;"
isochorismatase
|
|
SCNpilot_expt_500_bf_scaffold_264_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5191..5637
|
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
3-dehydroquinate dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5D0_NITMU
|
|
SCNpilot_expt_500_bf_scaffold_264_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5840..6301
|
Biotin carboxyl carrier protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5D1_NITMU
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:ABB76040.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_500_bf_scaffold_264_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6366..7721
|
Biotin carboxylase of acetyl-CoA carboxylase {ECO:0000313|EMBL:CCU61914.1}; EC=6.3.4.14 {ECO:0000313|EMBL:CCU61914.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
rbh
Biotin carboxylase of acetyl-CoA carboxylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH98_9PROT
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7918..8757
|
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
prmA; ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
rbh
Ribosomal protein L11 methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHQ7_9PROT
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_11
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9388..9774
|
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E09288
hypothetical protein
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
|
|
SCNpilot_expt_500_bf_scaffold_264_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10068..10880
|
ABC transporter related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5D5_NITMU
rbh
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein
rbh
ABC transporter related protein {ECO:0000313|EMBL:ABB76036.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_500_bf_scaffold_264_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10873..11670
|
Uncharacterized ABC transporter, permease component YrbE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR50_9PROT
rbh
ABC transporter permease {ECO:0000313|EMBL:KIO48764.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K02066 putative ABC transport system permease protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11670..12152
|
Uncharacterized ABC transporter, periplasmic component YrbD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH94_9PROT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIO48765.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K02067 putative ABC transport system substrate-binding protein
|
|
SCNpilot_expt_500_bf_scaffold_264_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12232..12876
|
Toluene tolerance n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5D8_NITMU
rbh
Signal peptide protein {ECO:0000313|EMBL:KIO48766.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
toluene tolerance; K07323 putative toluene tolerance protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12881..13183
|
STAS domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE5_9PROT
Anti-sigma-factor antagonist protein {ECO:0000313|EMBL:KIO48767.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Sulfate transporter/antisigma-factor antagonist STAS; K07122
|
|
SCNpilot_expt_500_bf_scaffold_264_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13336..13584
|
YrbA protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH89_9PROT
YrbA protein {ECO:0000313|EMBL:CCU61904.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
BolA-like protein
|
|
SCNpilot_expt_500_bf_scaffold_264_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13625..14473)
|
RNA polymerase sigma factor RpoH n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE0_9PROT
rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14590..15462)
|
Cell division protein FtsX n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFG3_9PROT
rbh
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K09811 cell division transport system permease protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15495..16148)
|
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR41_9PROT
rbh
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) {ECO:0000313|EMBL:CCU61900.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ABC transporter-like protein; K09812 cell division transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16203..17198)
|
Signal recognition particle receptor FtsY n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH87_9PROT
rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17473..18945
|
FIG015547: peptidase, M16 family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP8_9PROT
rbh
Peptidase M16 {ECO:0000313|EMBL:KIO48831.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_expt_500_bf_scaffold_264_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19084..20442
|
FIG015287: Zinc protease n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD8_9PROT
rbh
Zinc protease {ECO:0000313|EMBL:KIO48775.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_expt_500_bf_scaffold_264_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20488..21069
|
16S rRNA (Guanine(966)-N(2))-methyltransferase ## SSU rRNA m(2)G966 {ECO:0000313|EMBL:CCU61896.1}; EC=2.1.1.171 {ECO:0000313|EMBL:CCU61896.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
16S rRNA (Guanine(966)-N(2))-methyltransferase ## SSU rRNA m(2)G966 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFG2_9PROT
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_264_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21062..21565
|
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR36_9PROT
|
|
SCNpilot_expt_500_bf_scaffold_264_26
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21576..21827
|
Ferredoxin n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JRT4_9GAMM
fdx; ferredoxin
Ferredoxin {ECO:0000313|EMBL:ESQ15000.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
|
|
SCNpilot_expt_500_bf_scaffold_264_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21864..22619)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP3_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48779.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K06997
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22738..26220)
|
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
rbh
DNA polymerase III alpha subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD5_9PROT
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26543..28069)
|
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGI4_9PROT
rbh
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein {ECO:0000313|EMBL:CCU61594.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_264_30
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28191..28547)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQ64_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61595.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K09806 hypothetical protein
|