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SCNpilot_expt_500_bf_scaffold_794

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_794_1
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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978..2303
DNA (1326bp) protein (442aa)
Integrase family protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GGJ0_NITSI rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:AEJ00149.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_expt_500_bf_scaffold_794_2
unknown

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2340..2741
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_794_3
unknown

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3039..3425
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00037D23E3
SCNpilot_expt_500_bf_scaffold_794_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3466..4035
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG29_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61153.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_794_5
unknown

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4514..4933
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_794_6
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5522..6328)
DNA (807bp) protein (269aa)
GTP cyclohydrolase FolE2 {ECO:0000255|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000255|HAMAP-Rule:MF_01527};; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
GTP cyclohydrolase FolE2 n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=GCH4_NITEC
putative GTP cyclohydrolase; K09007 hypothetical protein
SCNpilot_expt_500_bf_scaffold_794_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6399..8243)
DNA (1845bp) protein (615aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DXS_NITMU rbh
SCNpilot_expt_500_bf_scaffold_794_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8287..9180)
DNA (894bp) protein (298aa)
polyprenyl synthetase; K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] rbh
Farnesyl-diphosphate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCH8_NITMU rbh
Geranyl transferase {ECO:0000313|EMBL:KIO47991.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_500_bf_scaffold_794_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9170..9424)
DNA (255bp) protein (85aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
exodeoxyribonuclease VII small subunit (EC:3.1.11.6); K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCH9_NITMU
SCNpilot_expt_500_bf_scaffold_794_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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9650..10774
DNA (1125bp) protein (375aa)
Rieske (2Fe-2S) region n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCI0_NITMU rbh
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:KIO47993.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Rieske (2Fe-2S) domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_794_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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10874..11218
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCI1_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO47994.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_794_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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11644..13506
DNA (1863bp) protein (621aa)
acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
AMP-dependent synthetase and ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCI2_NITMU rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:KIO47995.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_500_bf_scaffold_794_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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13514..14425
DNA (912bp) protein (304aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCI3_NITMU rbh
Epimerase {ECO:0000313|EMBL:KIO47996.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
NAD-dependent epimerase/dehydratase rbh
SCNpilot_expt_500_bf_scaffold_794_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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14445..14711
DNA (267bp) protein (89aa)
Phosphopantetheine-binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCI4_NITMU
phosphopantetheine-binding
Phosphopantetheine-binding protein {ECO:0000313|EMBL:KIO47997.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_500_bf_scaffold_794_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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14708..15895
DNA (1188bp) protein (396aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47); K00652 8-amino-7-oxononanoate synthase [EC:2.3.1.47] rbh
Serine palmitoyltransferase {ECO:0000313|EMBL:ABB73536.1}; EC=2.3.1.50 {ECO:0000313|EMBL:ABB73536.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Serine palmitoyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCI5_NITMU rbh
SCNpilot_expt_500_bf_scaffold_794_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16262..16858)
DNA (597bp) protein (199aa)
ORF4 protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCI6_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO47998.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
Displaying 16 items

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